RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 PAX8Q06710 450 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 PSG7Q13046 419 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 HNRNPA0Q13151 305 aaKnown RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 SGCAQ16586 387 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 TMEM155Q4W5P6 130 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 RUNDC3AQ59EK9 446 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 ARMC4Q5T2S8 1044 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 FAM27BQ5VT28 67 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 SLC25A47Q6Q0C1 308 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 DLEU7Q6UYE1 221 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 ZNF620Q6ZNG0 422 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 RFPL4BQ6ZWI9 263 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 HDDC2Q7Z4H3 204 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NANOGNBQ7Z5D8 188 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 LRRC28Q86X40 367 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 PTOV1Q86YD1 416 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 SPICQ8N5J4 248 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 C11orf65Q8NCR3 313 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NOXO1Q8NFA2 376 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 VANGL1Q8TAA9 524 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 GEMIN6Q8WXD5 167 aaKnown RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NABP1Q96AH0 204 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NMD3Q96D46 503 aaKnown RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 SAMD8Q96LT4 415 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 PRSS27Q9BQR3 290 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 MRI1Q9BV20 369 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 PARD6BQ9BYG5 372 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 PATZ1Q9HBE1 687 aaKnown RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 MEPEQ9NQ76 525 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 INIPQ9NRY2 104 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 TMEM106BQ9NUM4 274 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 DCAF16Q9NXF7 216 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NKIRAS1Q9NYS0 192 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 STX18Q9P2W9 335 aaKnown RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 SLC7A7Q9UM01 511 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 UGT2A1Q9Y4X1 527 aa4.97□□□□□ -1.61
CLCN3-207ENST00000511092 V9GYY5 206 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-207ENST00000511092 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 A8MXK9 166 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 F5H0A9 414 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-207ENST00000511092 CDK2AP2O75956 126 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 OR7A10O76100 309 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 IGF2P01344 180 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 MT-ND1P03886 318 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 TSPAN19P0C672 248 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 PPIAL4GP0DN37 164 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 LAP3P28838 519 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 CD80P33681 288 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 AQP2P41181 271 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 MTNR1AP48039 350 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 ARHGDIAP52565 204 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 MAGOHP61326 146 aaKnown RBP4.96□□□□□ -1.62
CLCN3-207ENST00000511092 BTG1P62324 171 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 ZMYND11Q15326 602 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 AGKQ53H12 422 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 C19orf54Q5BKX5 351 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 MTX3Q5HYI7 312 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 Q6ZR03 302 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 C9orf139Q6ZV77 190 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 ZER1Q7Z7L7 766 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 ZNF283Q8N7M2 679 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 ZSCAN4Q8NAM6 433 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-207ENST00000511092 CLRN3Q8NCR9 226 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 OR52E2Q8NGJ4 325 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 MOSPD2Q8NHP6 518 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 LIPHQ8WWY8 451 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 NSMAFQ92636 917 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 TFAP2CQ92754 450 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 HDAC2Q92769 488 aaKnown RBP4.96□□□□□ -1.62
CLCN3-207ENST00000511092 TAMM41Q96BW9 452 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 SGTBQ96EQ0 304 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 C4orf45Q96LM5 186 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 SIGLEC11Q96RL6 698 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 EBF4Q9BQW3 602 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 CCDC28BQ9BUN5 200 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 OR2H1Q9GZK4 316 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 WNT5BQ9H1J7 359 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 C16orf95Q9H693 158 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 NANOGQ9H9S0 305 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 SMURF2Q9HAU4 748 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 ELOVL3Q9HB03 270 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 C20orf141Q9NUB4 165 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 TIMM10BQ9Y5J6 103 aa4.96□□□□□ -1.62
CLCN3-207ENST00000511092 GMNCA6NCL1 334 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 NPIPB13A6NJU9 1138 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 NPIPB4C9JG80 1138 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 PRR23D1E9PI22 279 aaPredicted RBP4.95□□□□□ -1.62
CLCN3-207ENST00000511092 H0YHG0 523 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 TIMM8AO60220 97 aaPredicted RBP4.95□□□□□ -1.62
CLCN3-207ENST00000511092 VIMP08670 466 aaKnown RBP4.95□□□□□ -1.62
CLCN3-207ENST00000511092 CST2P09228 141 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 WNT2P09544 360 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 PRR23D2P0DMB1 279 aaPredicted RBP4.95□□□□□ -1.62
CLCN3-207ENST00000511092 NR2C1P13056 603 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 TUBG1P23258 451 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 TNFSF4P23510 183 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 CPT2P23786 658 aa4.95□□□□□ -1.62
CLCN3-207ENST00000511092 MDH2P40926 338 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms