RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ZNF43P17038 809 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 TBXA2RP21731 343 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 BCKDHBP21953 392 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CXCR2P25025 360 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 SERPINB1P30740 379 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CALCRP30988 508 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 MAGEA3P43357 314 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CX3CR1P49238 355 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 XKP51811 444 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 DIO3P55073 304 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 LINC00315P59091 139 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 OSTNP61366 133 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ZNF33BQ06732 778 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 C1orf61Q13536 156 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ZNHIT3Q15649 155 aaPredicted RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 TMEM249Q2WGJ8 235 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ZCWPW2Q504Y3 356 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 IDNKQ5T6J7 187 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 DDI2Q5TDH0 399 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 C9orf135Q5VTT2 229 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 DUPD1Q68J44 220 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 RTL6Q6ICC9 239 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ADNP2Q6IQ32 1131 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ANKRD26P1Q6NSI1 321 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CDC42EP5Q6NZY7 148 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ZNF621Q6ZSS3 439 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 SLC16A14Q7RTX9 510 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 SETD3Q86TU7 594 aaPredicted RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 ERI1Q8IV48 349 aaKnown RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 CDRT4Q8N9R6 151 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CATSPER1Q8NEC5 780 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 OR52E5Q8NH55 327 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 GPR151Q8TDV0 419 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 CA5BP1Q8WTZ4 195 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 PHF10Q8WUB8 498 aaKnown RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 FAM172AQ8WUF8 416 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 AP3S1Q92572 193 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 RNF170Q96K19 258 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 TBX15Q96SF7 602 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 TIMM29Q9BSF4 260 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 RTBDNQ9BSG5 229 aaPredicted RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 SLC25A39Q9BZJ4 359 aaPredicted RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 RHOJQ9H4E5 214 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 DIABLOQ9NR28 239 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 SIRT7Q9NRC8 400 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 PLEKHJ1Q9NW61 149 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 C1orf109Q9NX04 203 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 MRTO4Q9UKD2 239 aaKnown RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 NUP50Q9UKX7 468 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 PRPF19Q9UMS4 504 aaKnown RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 NEU3Q9UQ49 428 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 MMACHCQ9Y4U1 282 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 POLR3HQ9Y535 204 aaPredicted RBP2.95□□□□□ -1.94
NUP54-209ENST00000510569 SHANK3Q9BYB0 1731 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 ARFGEF2Q9Y6D5 1785 aa2.95□□□□□ -1.94
NUP54-209ENST00000510569 A0A1W2PPV9 198 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 A0A1W2PRF3 423 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 A0A1W2PRM7 423 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 H0YL77 283 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 K7ERI5 159 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 M0QXV9 152 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 SLC16A4O15374 487 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 BIRC5O15392 142 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 SMIM24O75264 130 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 ADAP1O75689 374 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 SC5DO75845 299 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 B3GAT3O94766 335 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 LYPLA2O95372 231 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 TMEM50AO95807 157 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 HLA-HP01893 362 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 FGGP02679 453 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 GAPDHP04406 335 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 IGF1P05019 195 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 WNT2P09544 360 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 IDSP22304 550 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 IVDP26440 423 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 GABRR2P28476 465 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 TGFBR2P37173 567 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 RPL13AP40429 203 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 P2RY1P47900 373 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 IDH2P48735 452 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 DNASE1L1P49184 302 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 KPNA2P52292 529 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 RPS6P62753 249 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 MRPS6P82932 125 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 SRYQ05066 204 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 PON3Q15166 354 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 PSG5Q15238 335 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 HAGHQ16775 308 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 KCTD19Q17RG1 926 aaPredicted RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 TEX30Q5JUR7 227 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 SAMD4BQ5PRF9 694 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 APOBEC3HQ6NTF7 200 aaKnown RBP2.94□□□□□ -1.94
NUP54-209ENST00000510569 LRRN1Q6UXK5 716 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 TMEM184AQ6ZMB5 413 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 DPY19L2P2Q6ZN68 376 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 CCDC121Q6ZUS5 278 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 ABHD13Q7L211 337 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 SSX7Q7RTT5 188 aa2.94□□□□□ -1.94
NUP54-209ENST00000510569 OR2W3Q7Z3T1 314 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms