RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 CDADC1Q9BWV3 514 aa11.12□□□□□ -0.63
SDHA-210ENST00000509420 SUCNR1Q9BXA5 334 aa11.12□□□□□ -0.63
SDHA-210ENST00000509420 MAGIXQ9H6Y5 334 aa11.12□□□□□ -0.63
SDHA-210ENST00000509420 PPP1R3EQ9H7J1 279 aa11.12□□□□□ -0.63
SDHA-210ENST00000509420 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
SDHA-210ENST00000509420 AUP1Q9Y679 476 aa11.12□□□□□ -0.63
SDHA-210ENST00000509420 IGHV2-70DA0A0C4DH43 119 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 CD300LBA8K4G0 201 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 B2RBV5 119 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 IFNL4K9M1U5 179 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 CCNB2O95067 398 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 LCATP04180 440 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 SLC2A1P11166 492 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 EGR1P18146 543 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 CA6P23280 308 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 IFNGR2P38484 337 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 SRP9P49458 86 aaKnown RBP11.11□□□□□ -0.63
SDHA-210ENST00000509420 SLC25A1P53007 311 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 TRIM25Q14258 630 aaKnown RBP11.11□□□□□ -0.63
SDHA-210ENST00000509420 MICAQ29983 383 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 KLHL12Q53G59 568 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 TEX30Q5JUR7 227 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 CD300LDQ6UXZ3 194 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 DCXRQ7Z4W1 244 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 WDR86Q86TI4 376 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 ADGRG5Q8IZF4 528 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 TEX29Q8N6K0 151 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 PROKR2Q8NFJ6 384 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 TAF15Q92804 592 aaKnown RBP eCLIP11.11□□□□□ -0.63
SDHA-210ENST00000509420 SPSB4Q96A44 273 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 UPRTQ96BW1 309 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 SSBP3Q9BWW4 388 aaPredicted RBP11.11□□□□□ -0.63
SDHA-210ENST00000509420 MARCH7Q9H992 704 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 ZNF319Q9P2F9 582 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 NUP50Q9UKX7 468 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 PPIAL4AQ9Y536 164 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 U3KQV3 271 aa11.11□□□□□ -0.63
SDHA-210ENST00000509420 TRIM77I1YAP6 450 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 HLA-DQA2P01906 255 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 SCGB2A2Q13296 93 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 ESCO2Q56NI9 601 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 OR2T5Q6IEZ7 315 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 RPL13AP3Q6NVV1 102 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 C12orf54Q6X4T0 127 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 PGAP1Q75T13 922 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 C11orf53Q8IXP5 236 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 BPIFB2Q8N4F0 458 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 IQCF1Q8N6M8 205 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 OR2AJ1Q8NGZ0 328 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 OR2T4Q8NH00 348 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 OR2T29Q8NH02 315 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 TSSK6Q9BXA6 273 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 MED20Q9H944 212 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 SMURF1Q9HCE7 757 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 NDE1Q9NXR1 346 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
SDHA-210ENST00000509420 IGHV3OR16-10A0A075B7F0 116 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 KIR2DS1A0A191URI9 304 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 MDFIC2A0A1B0GVS7 189 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 DHRS12A0PJE2 317 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 FAM183AA6NL82 134 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
SDHA-210ENST00000509420 RPS2P15880 293 aaKnown RBP11.09□□□□□ -0.63
SDHA-210ENST00000509420 CPT2P23786 658 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 ENTPD1P49961 510 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 TPTEP56180 551 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 ACTG1P63261 375 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 ELF3P78545 371 aaPredicted RBP11.09□□□□□ -0.63
SDHA-210ENST00000509420 WDR25Q64LD2 544 aaPredicted RBP11.09□□□□□ -0.63
SDHA-210ENST00000509420 DRAM2Q6UX65 266 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 DHFR2Q86XF0 187 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 TIGD4Q8IY51 512 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 ARHGAP24Q8N264 748 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 LINC00471Q8N535 108 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 GCSAMQ8N6F7 178 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 OR52L1Q8NGH7 329 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 SLAMF6Q96DU3 332 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 NEIL1Q96FI4 390 aaPredicted RBP11.09□□□□□ -0.63
SDHA-210ENST00000509420 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 FGF23Q9GZV9 251 aaPredicted RBP11.09□□□□□ -0.63
SDHA-210ENST00000509420 CMC2Q9NRP2 79 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 UFSP2Q9NUQ7 469 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 TBC1D23Q9NUY8 699 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 MIOXQ9UGB7 285 aa11.09□□□□□ -0.63
SDHA-210ENST00000509420 A0A1B0GW55 424 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 ZNF593O00488 134 aaPredicted RBP11.08□□□□□ -0.64
SDHA-210ENST00000509420 LHBP01229 141 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 SPARCP09486 303 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 DUX4L2P0CJ85 424 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 DUX4L3P0CJ86 424 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 DUX4L4P0CJ87 422 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 DUX4L5P0CJ88 424 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 DUX4L6P0CJ89 424 aa11.08□□□□□ -0.64
SDHA-210ENST00000509420 DUX4L7P0CJ90 424 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms