RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PQLC1Q8N2U9 271 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 CBR4Q8N4T8 237 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 IL17RDQ8NFM7 739 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 OR6K6Q8NGW6 343 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 SYNPRQ8TBG9 265 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 RNF133Q8WVZ7 376 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 APH1BQ8WW43 257 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 DVL3Q92997 716 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 SLAMF6Q96DU3 332 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 C18orf12Q96KH6 178 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 PITX2Q99697 317 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ATF6BQ99941 703 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ABHD6Q9BV23 337 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 C1QTNF5Q9BXJ0 243 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 BCL2L14Q9BZR8 327 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 OR51V1Q9H2C8 321 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 RIBC2Q9H4K1 309 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 YY1AP1Q9H869 796 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ADGRL4Q9HBW9 690 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 MSL2Q9HCI7 577 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 TBCCD1Q9NVR7 557 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 TVP23BQ9NYZ1 205 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 KIF17Q9P2E2 1029 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 DUSP13Q9UII6 198 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 PURGQ9UJV8 347 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 NDRG4Q9ULP0 352 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 POLR1DQ9Y2S0 133 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 ABCA1O95477 2261 aa6.11□□□□□ -1.43
TOPBP1-207ENST00000509162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 C17orf100A8MU93 164 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 H0YL77 283 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 M0R135 149 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 PSMD9O00233 223 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF205O95201 554 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 HLA-DQA2P01906 255 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 FCGR1AP12314 374 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 KITLGP21583 273 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 COL8A2P25067 703 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 PEX2P28328 305 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 PCBD1P61457 104 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 RPS23P62266 143 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 ESRRGP62508 458 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF92Q03936 586 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 PLP2Q04941 152 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 TMEM177Q53S58 311 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 OR2T2Q6IF00 324 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 FBXW12Q6X9E4 464 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 WDR86Q86TI4 376 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 ZDHHC13Q8IUH4 622 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 OR5AS1Q8N127 324 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 TCEANCQ8N8B7 351 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 GJC3Q8NFK1 279 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 OR10AD1Q8NGE0 317 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 OTOSQ8NHW6 89 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 TMEM163Q8TC26 289 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 DNAJC9Q8WXX5 260 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 CMBLQ96DG6 245 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF799Q96GE5 643 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 LYZL4Q96KX0 146 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 SIGLEC11Q96RL6 698 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 INTS14Q96SY0 518 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 VRK1Q99986 396 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 RHNO1Q9BSD3 238 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 WACQ9BTA9 647 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 REG4Q9BYZ8 158 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 TOR3AQ9H497 397 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 DYNLRB1Q9NP97 96 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 DNAJC27Q9NZQ0 273 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 GRIP1Q9Y3R0 1128 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 MALRD1Q5VYJ5 2156 aa6.1□□□□□ -1.43
TOPBP1-207ENST00000509162 MXRA5Q9NR99 2828 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 hCG_38984A0A1B0GV85 526 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 LRP5LA4QPB2 252 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 PRR23D1E9PI22 279 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 F5H5K5 113 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 H3BSA7 217 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 J3QRE1 110 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ZNF593O00488 134 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 SPRY3O43610 288 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 FCN3O75636 299 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 IFNGP01579 166 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 IGLV3-1P01715 115 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 HEXAP06865 529 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 CD55P08174 381 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ADH4P08319 380 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 PRR23D2P0DMB1 279 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 IGHV4-31P0DP07 118 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 DAOP14920 347 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ALOX5APP20292 161 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ACKR3P25106 362 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 GIFP27352 417 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 PMELP40967 661 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 NR4A2P43354 598 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 ALDH3A2P51648 485 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 PRKXP51817 358 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 RAD23AP54725 363 aa6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 EIF2B1Q14232 305 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-207ENST00000509162 GK2Q14410 553 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms