RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 FAM189A2Q15884 450 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 HSP90B2PQ58FF3 399 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 GPR139Q6DWJ6 353 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 PGM2L1Q6PCE3 622 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 CFAP77Q6ZQR2 320 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 PGAP1Q75T13 922 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 MRPL21Q7Z2W9 205 aaKnown RBP13.17□□□□□ -0.3
CXCL1-202ENST00000509101 ADCK1Q86TW2 530 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 FAM90A1Q86YD7 464 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 OR2T12Q8NG77 320 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 MED4Q9NPJ6 270 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 TRIM36Q9NQ86 728 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 C1orf123Q9NWV4 160 aa13.17□□□□□ -0.3
CXCL1-202ENST00000509101 DCTN6O00399 190 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 NDUFA2O43678 99 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 PRB3Q04118 309 aaPredicted RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 DBPQ10586 325 aaPredicted RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 POU4F2Q12837 409 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 KRTAP27-1Q3LI81 207 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 DNM1P34Q6PK57 102 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 ZNF826PQ6ZT77 177 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 GPX7Q96SL4 187 aaPredicted RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 PITX2Q99697 317 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 ATF6BQ99941 703 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 TMEM120AQ9BXJ8 343 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 SIRT7Q9NRC8 400 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 ONECUT1Q9UBC0 465 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 RPUSD1Q9UJJ7 312 aaKnown RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 SIGLEC7Q9Y286 467 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 TMEM5Q9Y2B1 443 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 NOP16Q9Y3C1 178 aaKnown RBP13.16□□□□□ -0.3
CXCL1-202ENST00000509101 IER3IP1Q9Y5U9 82 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 KPTNQ9Y664 436 aa13.16□□□□□ -0.3
CXCL1-202ENST00000509101 IGHV3OR15-7A0A075B7D8 119 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 IGLV1-36A0A0B4J1U3 117 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 A0A1B0GVI7 797 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 A0A1B0GW55 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 hCG_1807616A0A1W2PRN6 198 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 A6NLC8 198 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 ATP8B1O43520 1251 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 PTBP3O95758 552 aaKnown RBP13.15□□□□□ -0.3
CXCL1-202ENST00000509101 ZNF682O95780 498 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 ECDO95905 644 aaPredicted RBP13.15□□□□□ -0.3
CXCL1-202ENST00000509101 OPN1MWP04001 364 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L2P0CJ85 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L3P0CJ86 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L4P0CJ87 422 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L5P0CJ88 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L6P0CJ89 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L7P0CJ90 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 OPN1MW2P0DN77 364 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 OPN1MW3P0DN78 364 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
CXCL1-202ENST00000509101 CDONQ4KMG0 1287 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 SLC18B1Q6NT16 456 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4L9Q6RFH8 374 aaPredicted RBP13.15□□□□□ -0.3
CXCL1-202ENST00000509101 Q6ZTK2 550 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 RRM2BQ7LG56 351 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 GCSAMQ8N6F7 178 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 RSRC1Q96IZ7 334 aaKnown RBP13.15□□□□□ -0.3
CXCL1-202ENST00000509101 SLC22A4Q9H015 551 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 CNTD2Q9H8S5 307 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DNAJB11Q9UBS4 358 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 DUX4Q9UBX2 424 aa13.15□□□□□ -0.3
CXCL1-202ENST00000509101 CAB39Q9Y376 341 aaPredicted RBP13.15□□□□□ -0.3
CXCL1-202ENST00000509101 ANKRD61A6NGH8 418 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 CD300LBA8K4G0 201 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 GRPP07492 148 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 CRABP1P29762 137 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 TGFBR2P37173 567 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 MDH1P40925 334 aaKnown RBP13.14□□□□□ -0.31
CXCL1-202ENST00000509101 DLX1P56177 255 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 FXYD6P3P58550 94 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 ELF3P78545 371 aaPredicted RBP13.14□□□□□ -0.31
CXCL1-202ENST00000509101 KLRD1Q13241 179 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 HERPUD1Q15011 391 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 COQ5Q5HYK3 327 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 C11orf44Q8N8P7 122 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 SLC26A10Q8NG04 563 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 OR2AE1Q8NHA4 323 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 SLC7A13Q8TCU3 470 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 MRAPQ8TCY5 172 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 SIKE1Q9BRV8 207 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 PPA2Q9H2U2 334 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 GMPR2Q9P2T1 348 aaKnown RBP13.14□□□□□ -0.31
CXCL1-202ENST00000509101 AURKCQ9UQB9 309 aa13.14□□□□□ -0.31
CXCL1-202ENST00000509101 GMDSO60547 372 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 PTP4A3O75365 173 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 PPP1R3DO95685 299 aa13.13□□□□□ -0.31
CXCL1-202ENST00000509101 ANOS1P23352 680 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms