RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SLC2A8Q9NY64 477 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 COMMD9Q9P000 198 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 FOXJ2Q9P0K8 574 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 CNTRLQ7Z7A1 2325 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 MS4A18H0YCH9 400 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 EIF1AYO14602 144 aaKnown RBP9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 SIX6O95475 246 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 CCL3P10147 92 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 EIF1AXP47813 144 aaKnown RBP9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 ETFDHQ16134 617 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 ODF4Q2M2E3 257 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 MS4A18Q3C1V0 323 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 GLYATL3Q5SZD4 288 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 SFRP5Q5T4F7 317 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF660Q6AZW8 331 aaPredicted RBP9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 C6orf15Q6UXA7 325 aaPredicted RBP9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 LRRC69Q6ZNQ3 347 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF627Q7L945 461 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 PPP1R32Q7Z5V6 425 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF546Q86UE3 836 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 BEST3Q8N1M1 668 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 OR8S1Q8NH09 359 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 M1APQ8TC57 530 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 DDIT4LQ96D03 193 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 SDHAF3Q9NRP4 125 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 RAB22AQ9UL26 194 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 GTF2A1LQ9UNN4 478 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC22A13Q9Y226 551 aa9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 SPENQ96T58 3664 aaKnown RBP9.79□□□□□ -0.84
SH3RF1-203ENST00000508685 KNTC1P50748 2209 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 A0A1B0GTI1 187 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TP53I11O14683 189 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF208O43345 1280 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 KDM4BO94953 1096 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PNPP00491 289 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 HPP00738 406 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 AMY2AP04746 511 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 CTLA4P16410 223 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TBPP20226 339 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 MSX1P28360 303 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 SORDQ00796 357 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 POU3F1Q03052 451 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TLE3Q04726 772 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 Q0VFX4 171 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 MYBPHQ13203 477 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PCK2Q16822 640 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 C2orf68Q2NKX9 166 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TUSC1Q2TAM9 212 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF468Q5VIY5 522 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TFAP2EQ6VUC0 442 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC35D2Q76EJ3 337 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF584Q8IVC4 421 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 ZDHHC22Q8N966 263 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 OR5M8Q8NGP6 311 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 OR13C3Q8NGS6 347 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 MFSD8Q8NHS3 518 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 MRGPRX4Q96LA9 322 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 LDAHQ9H6V9 325 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 MED29Q9NX70 200 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TAS2R4Q9NYW5 299 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 LRP12Q9Y561 859 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PCSK5Q92824 1860 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 CACNA1CQ13936 2221 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 KANTRA0A1W2PQU2 76 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 LIPT2A6NK58 231 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 SRSF10O75494 262 aaKnown RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 CD34P28906 385 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 DAP3P51398 398 aaKnown RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 SSR4P51571 173 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 FMODQ06828 376 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PMPCAQ10713 525 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC25A53Q5H9E4 307 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PXDC1Q5TGL8 231 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 DCAF12L2Q5VW00 463 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 C3orf33Q6P1S2 294 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM81Q6P7N7 255 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 OPN5Q6U736 354 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 DHRS13Q6UX07 377 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 H1FNTQ75WM6 255 aaPredicted RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 MDGA2Q7Z553 956 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 RPS19BP1Q86WX3 136 aaKnown RBP9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 CCDC36Q8IYA8 594 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 STPG2Q8N412 459 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 BPIFB2Q8N4F0 458 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 KCNRGQ8N5I3 272 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PLPP7Q8NBV4 271 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 PXT1Q8NFP0 134 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 STEAP2Q8NFT2 490 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 OR4K17Q8NGC6 315 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 OR1S1Q8NH92 325 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 CXorf58Q96LI9 332 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 GNRHR2Q96P88 292 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 TAAR9Q96RI9 348 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 C12orf4Q9NQ89 552 aa9.78□□□□□ -0.84
SH3RF1-203ENST00000508685 ZC4H2Q9NQZ6 224 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms