RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MSX2P35548 267 aaPredicted RBP9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 FGF12P61328 243 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 TSPAN31Q12999 210 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 DEFB112Q30KQ8 113 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 SNAI3Q3KNW1 292 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 PGBD2Q6P3X8 592 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 SPATC1Q76KD6 591 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 BOLLQ8N9W6 283 aaKnown RBP9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 CYB561A3Q8NBI2 242 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 OR2AE1Q8NHA4 323 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 SPTSSAQ969W0 71 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 ERGIC1Q969X5 290 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 TECTBQ96PL2 329 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 ADAT1Q9BUB4 502 aaKnown RBP9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 FAM107BQ9H098 131 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 NSRP1Q9H0G5 558 aaKnown RBP9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 MMADHCQ9H3L0 296 aaPredicted RBP9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 EGLN3Q9H6Z9 239 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 KCNG2Q9UJ96 466 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 C5orf63A6NC05 138 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 TVP23AA6NH52 213 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 HOXA3O43365 443 aaPredicted RBP9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 ENSAO43768 121 aaKnown RBP9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 MDKP21741 143 aaPredicted RBP9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 PSMB10P40306 273 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNF92Q03936 586 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 GLYATL3Q5SZD4 288 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 GPR157Q5UAW9 335 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 RUSC1-AS1Q66K80 236 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 LYPD4Q6UWN0 246 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 ZDHHC21Q8IVQ6 265 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 PGAM4Q8N0Y7 254 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 PROKR2Q8NFJ6 384 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 OR9Q2Q8NGE9 314 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 OR52L1Q8NGH7 329 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNRF4Q8WWF5 429 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 PCGF1Q9BSM1 259 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 SLC22A4Q9H015 551 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 FN3KRPQ9HA64 309 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 NOP16Q9Y3C1 178 aaKnown RBP9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 CDH10Q9Y6N8 788 aa9.6□□□□□ -0.87
HMGCS1-204ENST00000507293 GGT3PA6NGU5 568 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 POM121CA8CG34 1229 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 SRRM5B3KS81 715 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 LGALS8O00214 317 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 BHLHE40O14503 412 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 SFTPBP07988 381 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 SPARCP09486 303 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 OMGP23515 440 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 CFHR2P36980 270 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 NPY4RP50391 375 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 SAMD4BQ5PRF9 694 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 SFRP4Q6FHJ7 346 aaPredicted RBP9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 RPL13AP3Q6NVV1 102 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 C16orf87Q6PH81 154 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 DRAM2Q6UX65 266 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 DCXRQ7Z4W1 244 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 OR51L1Q8NGJ5 315 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 OR8D4Q8NGM9 314 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 OR9Q1Q8NGQ5 310 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 OR2T4Q8NH00 348 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 TMIGD2Q96BF3 282 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 DDOQ99489 341 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 COPS4Q9BT78 406 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 PRDM13Q9H4Q3 707 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 IL1RAPQ9NPH3 570 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 TNFRSF19Q9NS68 423 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 ERVK-18Q9QC07 812 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 CD300AQ9UGN4 299 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 COMMD3-BMI1R4GMX3 469 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 MGAM2Q2M2H8 2515 aa9.59□□□□□ -0.87
HMGCS1-204ENST00000507293 A6NLC8 198 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 ADAM20O43506 726 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 SNX3O60493 162 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 GMDSO60547 372 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 PTBP3O95758 552 aaKnown RBP9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 SLC2A1P11166 492 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 OTX1P32242 354 aaPredicted RBP9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 PRKXP51817 358 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 OR8B8Q15620 311 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 KCNJ8Q15842 424 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 CD276Q5ZPR3 534 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 TREML4Q6UXN2 200 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 ZNF826PQ6ZT77 177 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 LNX2Q8N448 690 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 SLC37A3Q8NCC5 494 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 OR56B2PQ8NGI1 322 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 OR4C15Q8NGM1 316 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 TBX15Q96SF7 602 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 CDRT15Q96T59 188 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 BTBD10Q9BSF8 475 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 SLITRK2Q9H156 845 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 MARCH7Q9H992 704 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 SMURF1Q9HCE7 757 aa9.58□□□□□ -0.88
HMGCS1-204ENST00000507293 TBC1D23Q9NUY8 699 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms