RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 NAALAD2Q9Y3Q0 740 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 SAMHD1Q9Y3Z3 626 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MMACHCQ9Y4U1 282 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 CLCA3PQ9Y6N3 262 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 HSPE1-MOB4S4R3N1 261 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF106Q9H2Y7 1883 aaKnown RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 KIF26AQ9ULI4 1882 aaPredicted RBP1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 KIAA1549LQ6ZVL6 1849 aa1.96□□□□□ -2.1
TOPBP1-205ENST00000506779 MIA3Q5JRA6 1907 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MN1Q10571 1320 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 BDP1A6H8Y1 2624 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 PLXNA2O75051 1894 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 DENND4AQ7Z401 1863 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GBF1Q92538 1859 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 BPTFQ12830 3046 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A087WXM4 84 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 IGHV5-51A0A0C4DH38 117 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A0G2JN53 185 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A1B0GX78 115 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ARRDC5A6NEK1 342 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 H3BNH8 94 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SGK494L7N484 410 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TNFRSF11BO00300 401 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 UPK1AO00322 258 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 HMGN4O00479 90 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 FAAHO00519 579 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 EI24O14681 340 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 POLR1CO15160 346 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ACOX3O15254 700 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CHST10O43529 356 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GPRIN2O60269 458 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MRPS14O60783 128 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 B4GALT2O60909 372 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 RDH16O75452 317 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SCRG1O75711 98 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 UGT2B17O75795 530 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 KBTBD11O94819 623 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CCNB2O95067 398 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MFN2O95140 757 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GADD45GO95257 159 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 LDOC1O95751 146 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MT-ND1P03886 318 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 IFNA16P05015 189 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ALPPP05187 535 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 BCHEP06276 602 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SFTPBP07988 381 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GIG44P09565 113 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 PABPC4LP0CB38 370 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 OR12D1P0DN82 309 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TDGF1P13385 188 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ICAM2P13598 275 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 PVRP15151 417 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GSTM3P21266 225 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 DRD5P21918 477 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 BCKDHBP21953 392 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 IGFBP5P24593 272 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 AQP1P29972 269 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 RORAP35398 523 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ALDH3B1P43353 468 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 XCR1P46094 333 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ERFP50548 548 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CCL11P51671 97 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 GTF2A1P52655 376 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 AQP4P55087 323 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CXCR4P61073 352 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 COPZ1P61923 177 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ST3GAL3Q11203 375 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 NPRL3Q12980 569 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 EIF3IQ13347 325 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 DGCR6Q14129 220 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SELPLGQ14242 412 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 PDK3Q15120 406 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ANGPT1Q15389 498 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 NSDHLQ15738 373 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 NRF1Q16656 503 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 HAGHQ16775 308 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MICAQ29983 383 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ARHGAP11BQ3KRB8 267 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC36A3Q495N2 470 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 LIN52Q52LA3 116 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF311Q5JNZ3 666 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 RBM48Q5RL73 367 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 NKAIN2Q5VXU1 208 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 RPL13AP3Q6NVV1 102 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 STEAP1BQ6NZ63 245 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TNFAIP8L2Q6P589 184 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TTC33Q6PID6 262 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 DHRS4L2Q6PKH6 230 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ENPP6Q6UWR7 440 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM107Q6UX40 140 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 CCBE1Q6UXH8 406 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF550Q7Z398 422 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 ADCK1Q86TW2 530 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 C8orf59Q8N0T1 100 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 EID2Q8N6I1 236 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 SAMD12Q8N8I0 201 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 COX18Q8N8Q8 333 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM105Q8N8V8 129 aa1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 Q8N9G6 341 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-205ENST00000506779 MORN4Q8NDC4 146 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms