RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ACBD4Q8NC06 268 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 OR13C3Q8NGS6 347 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 FBXO17Q96EF6 278 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 LPAR4Q99677 370 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 ARV1Q9H2C2 271 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 ZMAT3Q9HA38 289 aaKnown RBP14.2□□□□□ -0.14
SCLT1-208ENST00000506368 PLEKHA2Q9HB19 425 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 KCNJ16Q9NPI9 418 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 CGGBP1Q9UFW8 167 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-208ENST00000506368 SUSD2Q9UGT4 822 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 SLC17A4Q9Y2C5 497 aa14.2□□□□□ -0.14
SCLT1-208ENST00000506368 DCDC2BA2VCK2 349 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 IGLON5A6NGN9 336 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 GPR37O15354 613 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 IGKV1D-16P01601 117 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 OR8U9P0C7N5 309 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 TBC1D3HP0C7X1 549 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 C5AR1P21730 350 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 EBPQ15125 230 aaKnown RBP14.19□□□□□ -0.14
SCLT1-208ENST00000506368 TCEA2Q15560 299 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 ETV3LQ6ZN32 361 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 CHST4Q8NCG5 386 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 OR13D1Q8NGV5 346 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 OR8U1Q8NH10 309 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 RHBDD1Q8TEB9 315 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 SLAMF9Q96A28 289 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 ARSGQ96EG1 525 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 C14orf144Q96I85 54 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 SLC35B3Q9H1N7 401 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 C5orf66Q9H5L9 145 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 METTL8Q9H825 291 aaKnown RBP14.19□□□□□ -0.14
SCLT1-208ENST00000506368 SPACA1Q9HBV2 294 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 DCAF16Q9NXF7 216 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 SLC22A13Q9Y226 551 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 RHBDD3Q9Y3P4 386 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 R4GMQ9 66 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 UMAD1C9J7I0 102 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 K7EPK0 472 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 SLC31A2O15432 143 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 OR10H2O60403 315 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 OR6A2O95222 327 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 ACTR1BP42025 376 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 ECI1P42126 302 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 PKIAP61925 76 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 RAB32Q13637 225 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 FAM53BQ14153 422 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.19□□□□□ -0.14
SCLT1-208ENST00000506368 FAM71E2Q8N5Q1 922 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 VSTM2LQ96N03 204 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 YPEL4Q96NS1 127 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 IP6K3Q96PC2 410 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 AMELYQ99218 206 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 RSRP1Q9BUV0 290 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 UBQLN4Q9NRR5 601 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 PILRAQ9UKJ1 303 aa14.19□□□□□ -0.14
SCLT1-208ENST00000506368 ZNF346Q9UL40 294 aaKnown RBP14.19□□□□□ -0.14
SCLT1-208ENST00000506368 POM121BA6NF01 834 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 TSTD3H0UI37 97 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 PRAMEF26H0Y7S4 382 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 AGPAT2O15120 278 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 TGOLN2O43493 480 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 GMFGO60234 142 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 GPANK1O95872 356 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 DANCRP0C864 163 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 SELLP14151 372 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 NME1P15531 152 aaKnown RBP14.18□□□□□ -0.14
SCLT1-208ENST00000506368 RPL12P30050 165 aaKnown RBP14.18□□□□□ -0.14
SCLT1-208ENST00000506368 RAB38P57729 211 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 OR2B8PP59922 312 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 RAP1AP62834 184 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 NCMAPQ5T1S8 102 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 HIST2H3PS2Q5TEC6 136 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 TMPPEQ6ZT21 453 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 RNF44Q7L0R7 432 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 LRRC18Q8N456 261 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 SLC22A24Q8N4F4 322 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 ZNF383Q8NA42 475 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 SUSD6Q92537 303 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 TMEM230Q96A57 120 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 RERGQ96A58 199 aaPredicted RBP14.18□□□□□ -0.14
SCLT1-208ENST00000506368 ISOC2Q96AB3 205 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 SCRT1Q9BWW7 348 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 CNTNAP3Q9BZ76 1288 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 TWSG1Q9GZX9 223 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 PPP1R14DQ9NXH3 145 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 B9D1Q9UPM9 204 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 A0A087WWC5 75 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 CXorf65A6NEN9 183 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 ZNF217O75362 1048 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 PNPP00491 289 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 CHATP28329 748 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 CLINT1Q14677 625 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 DEGS2Q6QHC5 323 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 LRRC69Q6ZNQ3 347 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 GVQW1Q8N7I0 195 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 OR9A4Q8NGU2 314 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 C8orf44Q96CB5 159 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 GDE1Q9NZC3 331 aa14.18□□□□□ -0.14
SCLT1-208ENST00000506368 MRPS23Q9Y3D9 190 aaKnown RBP14.18□□□□□ -0.14
SCLT1-208ENST00000506368 BORCS7-ASMTA0A0B4J1R7 106 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms