RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 XRCC3O43542 346 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 AKAP8O43823 692 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 EDF1O60869 148 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 SCN2BO60939 215 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 PTBP3O95758 552 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 PTHP01270 115 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 RPLP1P05386 114 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 DBIP07108 87 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 ETS2P15036 469 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 IL7RP16871 459 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 PAICSP22234 425 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 CCNOP22674 350 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 CBLP22681 906 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 APLNRP35414 380 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 MRPL19P49406 292 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 SRP9P49458 86 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 UFM1P61960 85 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 PSG4Q00888 419 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZNF45Q02386 682 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 POU4F2Q12837 409 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 EPS8Q12929 822 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 MPP2Q14168 576 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ABCA11PQ4W5N1 156 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 AGKQ53H12 422 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 RABL3Q5HYI8 236 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 MRPL2Q5T653 305 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 INTS11Q5TA45 600 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 RNF220Q5VTB9 566 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 PRAMEF6Q5VXH4 476 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 TEX36Q5VZQ5 186 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 TYW3Q6IPR3 259 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 TMEM53Q6P2H8 277 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ACSM6Q6P461 480 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 BAIAP2L2Q6UXY1 529 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ACP7Q6ZNF0 438 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 LRRC74BQ6ZQY2 392 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZNF621Q6ZSS3 439 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 SLC16A14Q7RTX9 510 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 C6orf120Q7Z4R8 191 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ARPINQ7Z6K5 226 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 DPPA2Q7Z7J5 298 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZER1Q7Z7L7 766 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 RANBP3LQ86VV4 465 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 SLC30A8Q8IWU4 369 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 RIMKLAQ8IXN7 391 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZDHHC23Q8IYP9 409 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 OR5AS1Q8N127 324 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 GCSAMQ8N6F7 178 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 FAM216BQ8N7L0 139 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 RNF152Q8N8N0 203 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ATG16L2Q8NAA4 619 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 SYT8Q8NBV8 401 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 C11orf65Q8NCR3 313 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 OR9I1Q8NGQ6 314 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 AKR7LQ8NHP1 331 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZNF417Q8TAU3 575 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 MIPOL1Q8TD10 442 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 PHLDA1Q8WV24 401 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 XAGE5Q8WWM1 108 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ROPN1LQ96C74 230 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 CMBLQ96DG6 245 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 SLC41A3Q96GZ6 507 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 TEX37Q96LM6 180 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 NOL4LQ96MY1 436 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 TRNT1Q96Q11 434 aaKnown RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 OR52B2Q96RD2 323 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZNF587Q96SQ5 575 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 SPATA9Q9BWV2 254 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 TAPBPLQ9BX59 468 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 TMEM120AQ9BXJ8 343 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 C20orf27Q9GZN8 174 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 FAM107BQ9H098 131 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 WNT5BQ9H1J7 359 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 LRMDAQ9H2I8 198 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 TPT1P8Q9HAU6 139 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 SEBOXQ9HB31 216 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 SLCO1B3Q9NPD5 702 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 FGFR1OP2Q9NVK5 253 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 SIGLEC8Q9NYZ4 499 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 CCDC167Q9P0B6 97 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 RPS6KB2Q9UBS0 482 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 PITPNC1Q9UKF7 332 aa2.56□□□□□ -2
TCOF1-208ENST00000506063 ZNF443Q9Y2A4 671 aaPredicted RBP2.56□□□□□ -2
TCOF1-208ENST00000506063 IGKV1D-42A0A075B6H8 117 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 IGHV3OR15-7A0A075B7D8 119 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 TRAV38-1A0A0B4J264 116 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 A0A0J9YWU9 116 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 CFAP73A6NFT4 308 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 ODF3BA8MYP8 253 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 H3BSH0 61 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 CLIC1O00299 241 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 HMGN4O00479 90 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 NDUFAB1O14561 156 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 MRASO14807 208 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 SLC22A2O15244 555 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 ATP8B1O43520 1251 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 NDUFA2O43678 99 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 GMNNO75496 209 aa2.55□□□□□ -2
TCOF1-208ENST00000506063 SERPINB7O75635 380 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms