RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OR5L1Q8NGL2 311 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 SLC25A40Q8TBP6 338 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 TMEM171Q8WVE6 324 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 APOBEC3DQ96AK3 386 aaPredicted RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 TMEM80Q96HE8 168 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 COG8Q96MW5 612 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 ALG8Q9BVK2 526 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 C1QTNF5Q9BXJ0 243 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 SP140LQ9H930 580 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 FAIMQ9NVQ4 179 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 MRM2Q9UI43 246 aaKnown RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 GNG8Q9UK08 70 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 FZR1Q9UM11 496 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 CMAHPQ9Y471 501 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 CHD3Q12873 2000 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 TMEM269A0A1B0GVZ9 245 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 METTL15A6NJ78 407 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 PTGES3LE9PB15 166 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 TBX1O43435 398 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 SULT1C4O75897 302 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 RPP14O95059 124 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 IFNA2P01563 188 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 OR4A8P0C604 315 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 CCDC159P0C7I6 412 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 GCH1P30793 250 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 DCTDP32321 178 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 TTKP33981 857 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 SERPINF1P36955 418 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 SELENOVP59797 346 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 ST3GAL4Q11206 333 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 MALLQ13021 153 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 GALEQ14376 348 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 ADIPOQQ15848 244 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 SNAI3Q3KNW1 292 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 ZNF718Q3SXZ3 478 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 CDONQ4KMG0 1287 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 TP53I3Q53FA7 332 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 RBM48Q5RL73 367 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 AGAP6Q5VW22 663 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 C20orf204Q6ZNR8 217 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 COLCA1Q6ZS62 124 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 FAM57BQ71RH2 274 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 CIARTQ8N365 385 aaPredicted RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 MUC15Q8N387 334 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 ZNF611Q8N823 705 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 MYDGFQ969H8 173 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 MRPL24Q96A35 216 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 PGAM5Q96HS1 289 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 JAM3Q9BX67 310 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 OR2J1Q9GZK6 312 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 OR10A2Q9H208 303 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 POFUT1Q9H488 388 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 PLK3Q9H4B4 646 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 ERVK13-1Q9NX77 482 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 PTTG3PQ9NZH4 202 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 BLOC1S6Q9UL45 172 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 GTF2A1LQ9UNN4 478 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 DIMT1Q9UNQ2 313 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 STARD10Q9Y365 291 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 EXOSC1Q9Y3B2 195 aaKnown RBP8.61□□□□□ -1.03
NUP54-203ENST00000504173 TPRKBQ9Y3C4 175 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 PCDHGB5Q9Y5G0 923 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 PLCE1Q9P212 2302 aa8.61□□□□□ -1.03
NUP54-203ENST00000504173 A0A1W2PPW3 197 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 LOC110117498-PIK3R3F6TDL0 507 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 H3BSA7 217 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 J3QLW9 94 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 TACSTD2P09758 323 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 ZNF19P17023 458 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 TUBG1P23258 451 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 ETV1P50549 477 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 KLF3P57682 345 aaPredicted RBP8.6□□□□□ -1.03
NUP54-203ENST00000504173 OR12D2P58182 307 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 MFGE8Q08431 387 aaPredicted RBP8.6□□□□□ -1.03
NUP54-203ENST00000504173 TIGD6Q17RP2 521 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 GLYATL3Q5SZD4 288 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 ZNF684Q5T5D7 378 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 LIPNQ5VXI9 398 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 TMPRSS11AQ6ZMR5 421 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 KCTD20Q7Z5Y7 419 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 KLHL36Q8N4N3 616 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 OR8B12Q8NGG6 310 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 OR52H1Q8NGJ2 320 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 SYNPRQ8TBG9 265 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 MARS2Q96GW9 593 aaKnown RBP8.6□□□□□ -1.03
NUP54-203ENST00000504173 C4orf36Q96KX1 117 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 SYT3Q9BQG1 590 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 MRPL37Q9BZE1 423 aaKnown RBP8.6□□□□□ -1.03
NUP54-203ENST00000504173 MOB1AQ9H8S9 216 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 TUBG2Q9NRH3 451 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 ACOXLQ9NUZ1 547 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 FAM206AQ9NX38 181 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 UBAP1Q9NZ09 502 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 DUSP13Q9UII6 198 aa8.6□□□□□ -1.03
NUP54-203ENST00000504173 R4GMQ9 66 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms