RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 LPCAT3Q6P1A2 487 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 FOXL2NBQ6ZUU3 175 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 CHMP1BQ7LBR1 199 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 ABHD12BQ7Z5M8 362 aaPredicted RBP10.61□□□□□ -0.71
NUP54-202ENST00000502850 BIVMQ86UB2 503 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 GJC3Q8NFK1 279 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 OR2AK2Q8NG84 335 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 OR4D6Q8NGJ1 314 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 OR5M1Q8NGP8 315 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 KCNE4Q8WWG9 221 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 TMEM54Q969K7 222 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 NTNG2Q96CW9 530 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 ZPBPQ9BS86 351 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 NELFAQ9H3P2 528 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 KCNK15Q9H427 330 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 SMOC1Q9H4F8 434 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 MAB21L2Q9Y586 359 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 A0A1B0GTI1 187 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 LINC00862A6NCI5 91 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 HMSDA8MTL9 139 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 H3BUI4 141 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 L7N2F9 121 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ZNF883P0CG24 379 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 VSIG10L2P0DP72 767 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ACP1P24666 158 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ZNF84P51523 738 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ZNF121P58317 390 aaPredicted RBP10.6□□□□□ -0.71
NUP54-202ENST00000502850 RAC1P63000 192 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 INPP5JQ15735 1006 aaPredicted RBP10.6□□□□□ -0.71
NUP54-202ENST00000502850 ZNF260Q3ZCT1 412 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ACTBL2Q562R1 376 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
NUP54-202ENST00000502850 CLVS2Q5SYC1 327 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 DCAF12Q5T6F0 453 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 IDO2Q6ZQW0 420 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ZNF283Q8N7M2 679 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
NUP54-202ENST00000502850 OR52N4Q8NGI2 321 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 OR13C9Q8NGT0 318 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 OR8S1Q8NH09 359 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 OR51E1Q8TCB6 317 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 C10orf35Q96D05 121 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 ADAT3Q96EY9 351 aaPredicted RBP10.6□□□□□ -0.71
NUP54-202ENST00000502850 SF3B5Q9BWJ5 86 aaKnown RBP10.6□□□□□ -0.71
NUP54-202ENST00000502850 CHIAQ9BZP6 476 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 CDCP1Q9H5V8 836 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 IFT46Q9NQC8 304 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 PIPOXQ9P0Z9 390 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 GHRLQ9UBU3 117 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 SPTBN2O15020 2390 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 KIAA1549Q9HCM3 1950 aa10.6□□□□□ -0.71
NUP54-202ENST00000502850 PLSCR5A0PG75 271 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 MEIS3P1A6NDR6 274 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 TMEM14DPA8MWL7 114 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 G3V3Q6 166 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 GSTP1P09211 210 aaKnown RBP10.59□□□□□ -0.71
NUP54-202ENST00000502850 CCL3P10147 92 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 SRD5A2P31213 254 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 CHAF1BQ13112 559 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 ARL6IP1Q15041 203 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 C11orf88Q6PI97 169 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 TRAPPC6BQ86SZ2 158 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 BPIFB2Q8N4F0 458 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 ZDHHC22Q8N966 263 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 OR8B12Q8NGG6 310 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 KCNG3Q8TAE7 436 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 STRADBQ9C0K7 418 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 POFUT1Q9H488 388 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 HEXA-AS1Q9H8Q6 139 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 AKIRIN1Q9H9L7 192 aaPredicted RBP10.59□□□□□ -0.71
NUP54-202ENST00000502850 ZNF160Q9HCG1 818 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 PNRC2Q9NPJ4 139 aaKnown RBP10.59□□□□□ -0.71
NUP54-202ENST00000502850 CA10Q9NS85 328 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 OPN4Q9UHM6 478 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 ALPK2Q86TB3 2170 aa10.59□□□□□ -0.71
NUP54-202ENST00000502850 PHF3Q92576 2039 aaKnown RBP10.59□□□□□ -0.71
NUP54-202ENST00000502850 A0A0U1RQV5 110 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 LOC101059948A0A1B0GTJ6 334 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 TMEM235A6NFC5 223 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR6C65A6NJZ3 312 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 ZNF814B7Z6K7 855 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 RAB27BO00194 218 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 TM4SF5O14894 197 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 LMX1BO60663 402 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 TOXO94900 526 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 HPP00738 406 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 P04436 131 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 VSIG8P0DPA2 414 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 CCL4P13236 92 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 NFYAP23511 347 aaPredicted RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 CDAP32320 146 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 THBS4P35443 961 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 OR3A3P47888 321 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 PRKXP51817 358 aa10.58□□□□□ -0.72
NUP54-202ENST00000502850 SUCLG1P53597 346 aaKnown RBP10.58□□□□□ -0.72
NUP54-202ENST00000502850 QRFPP83859 136 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms