RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ZIC1Q15915 447 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 COX19Q49B96 90 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 SPOPLQ6IQ16 392 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 STRADAQ7RTN6 431 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 CCDC71Q8IV32 467 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ENTHD1Q8IYW4 607 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 PGAM4Q8N0Y7 254 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 PDIK1LQ8N165 341 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ACOT4Q8N9L9 421 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR4K2Q8NGD2 314 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ITFG1Q8TB96 612 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 LNX1Q8TBB1 728 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 DYRK2Q92630 601 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 FGF11Q92914 225 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 SMARCD1Q96GM5 515 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 SNF8Q96H20 258 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 MS4A14Q96JA4 679 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ADGRG7Q96K78 797 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 IL17FQ96PD4 163 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 RCHY1Q96PM5 261 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR8B4Q96RC9 309 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 RANBP9Q96S59 729 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 PSMB7Q99436 277 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 VAT1Q99536 393 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 CIB1Q99828 191 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ATF6BQ99941 703 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 FOXC2Q99958 501 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 NICN1Q9BSH3 213 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 CCDC28BQ9BUN5 200 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ELOVL4Q9GZR5 314 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 ING2Q9H160 280 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 TUBB1Q9H4B7 451 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRIM45Q9H8W5 580 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 FKRPQ9H9S5 495 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 IL1RAPQ9NPH3 570 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 PLEKHJ1Q9NW61 149 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 MCUBQ9NWR8 336 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 TAS2R9Q9NYW1 312 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 CD274Q9NZQ7 290 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 APOBEC3BQ9UH17 382 aaKnown RBP3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 RSPH14Q9UHP6 348 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 FBXL3Q9UKT7 428 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 SAMHD1Q9Y3Z3 626 aaKnown RBP3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 POLR3HQ9Y535 204 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 LAMA5O15230 3695 aa3.56□□□□□ -1.84
HMGB1P21-201ENST00000502313 SPEGQ15772 3267 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 EP300Q09472 2414 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 OTOGLQ3ZCN5 2332 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 F5P12259 2224 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZFHX4Q86UP3 3567 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 NOTCH4Q99466 2003 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 VWA8A3KMH1 1905 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 MYH15Q9Y2K3 1946 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRAV8-7A0A075B6U6 113 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 A0A0A6YYD5 115 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 GLYATL1P3A0A0U1RQE8 302 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 A0A1B0GTI1 187 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 NPIPB9F8W1W9 429 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 H7C0C1 242 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 PFDN6O15212 129 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 MBTPS2O43462 519 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 BUB3O43684 328 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CST8O60676 142 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 TSHBP01222 138 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 HBE1P02100 147 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR9G9P0C7N8 305 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 SLC35E2P0CK97 266 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 DAOP14920 347 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF250P15622 560 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CD1DP15813 335 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 SELEP16581 610 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF12P17014 697 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 SDC1P18827 310 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ALDH3A1P30838 453 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CBX5P45973 191 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 HSPA13P48723 471 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 RPL34P49207 117 aaKnown RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 RGS6P49758 472 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR2B8PP59922 312 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 PAFAH1B2P68402 229 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 TMEM249Q2WGJ8 235 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ACTL10Q5JWF8 245 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 BRMS1LQ5PSV4 323 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 BSPRYQ5W0U4 402 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF57Q68EA5 555 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 USP43Q70EL4 1123 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZFP82Q8N141 532 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 CYP4Z2PQ8N1L4 340 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 C2orf73Q8N5S3 287 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 C19orf18Q8NEA5 215 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 PRSS33Q8NF86 280 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR2G2Q8NGZ5 317 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR51A7Q8NH64 312 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 RFESDQ8TAC1 157 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 SPPL2BQ8TCT7 592 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 PYROXD1Q8WU10 500 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 IL1F10Q8WWZ1 152 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 RXFP2Q8WXD0 754 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR5P2Q8WZ92 322 aa3.55□□□□□ -1.84
HMGB1P21-201ENST00000502313 MRPS31Q92665 395 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms