RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ERI1Q8IV48 349 aaKnown RBP13.54□□□□□ -0.24
NR1H3-227ENST00000498548 C19orf18Q8NEA5 215 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 OR4M2Q8NGB6 313 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 OR6N2Q8NGY6 317 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 SPRYD4Q8WW59 207 aaPredicted RBP13.54□□□□□ -0.24
NR1H3-227ENST00000498548 DVL3Q92997 716 aaPredicted RBP13.54□□□□□ -0.24
NR1H3-227ENST00000498548 OR51V1Q9H2C8 321 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 C7orf69Q9H7B7 122 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 MMP26Q9NRE1 261 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 DDX28Q9NUL7 540 aaKnown RBP13.54□□□□□ -0.24
NR1H3-227ENST00000498548 GGT3PA6NGU5 568 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 TRAPPC2LH3BP13 241 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 FKBP6O75344 327 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 E2F6O75461 281 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 CA6P23280 308 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 MAB21L1Q13394 359 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 PCK2Q16822 640 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 TMEM155Q4W5P6 130 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 KLHL36Q8N4N3 616 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 SPICQ8N5J4 248 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 KCNJ15Q99712 375 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 UFSP2Q9NUQ7 469 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 OPN4Q9UHM6 478 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 POMPQ9Y244 141 aa13.53□□□□□ -0.24
NR1H3-227ENST00000498548 TCRBV3S1A0A5B6 114 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 CD300LBA8K4G0 201 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 CEACAM18A8MTB9 384 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 FOXH1O75593 365 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 DNAJC8O75937 253 aaPredicted RBP13.52□□□□□ -0.25
NR1H3-227ENST00000498548 GSTT1P30711 240 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 OTX1P32242 354 aaPredicted RBP13.52□□□□□ -0.25
NR1H3-227ENST00000498548 MDH2P40926 338 aaKnown RBP13.52□□□□□ -0.25
NR1H3-227ENST00000498548 GK3PQ14409 553 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 OR8G1Q15617 311 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 MPPED2Q15777 294 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 TMEM236Q5W0B7 351 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 DPY19L4Q7Z388 723 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 ZMYND19Q96E35 227 aaPredicted RBP13.52□□□□□ -0.25
NR1H3-227ENST00000498548 INTS14Q96SY0 518 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 AMELYQ99218 206 aa13.52□□□□□ -0.25
NR1H3-227ENST00000498548 CADM1Q9BY67 442 aaKnown RBP13.52□□□□□ -0.25
NR1H3-227ENST00000498548 A0A1B0GWJ7 208 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 ARRDC5A6NEK1 342 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF878C9JN71 531 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 F5H0A9 414 aaPredicted RBP13.51□□□□□ -0.25
NR1H3-227ENST00000498548 GSC2O15499 205 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 TBX1O43435 398 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 GLCEO94923 617 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 WNT2P09544 360 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 OSMP13725 252 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 EPHA1P21709 976 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 PLBD1Q6P4A8 553 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 C1QL2Q7Z5L3 287 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 DEFB108BQ8NET1 73 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 TMEM246Q9BRR3 403 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 ABHD6Q9BV23 337 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF556Q9HAH1 456 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 DNAJC27Q9NZQ0 273 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 MXRA5Q9NR99 2828 aa13.51□□□□□ -0.25
NR1H3-227ENST00000498548 PRR23D1E9PI22 279 aaPredicted RBP13.5□□□□□ -0.25
NR1H3-227ENST00000498548 J3QLI3 93 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 IFNL4K9M1U5 179 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 SELENOFO60613 162 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 FAM20BO75063 409 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 TIPRLO75663 272 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 ANXA2P07355 339 aaKnown RBP13.5□□□□□ -0.25
NR1H3-227ENST00000498548 PRR23D2P0DMB1 279 aaPredicted RBP13.5□□□□□ -0.25
NR1H3-227ENST00000498548 HSD11B1P28845 292 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 CD200P41217 278 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 CX3CR1P49238 355 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 CDK5Q00535 292 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 LYPD2Q6UXB3 125 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 CPOQ8IVL8 374 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 TIGD4Q8IY51 512 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 BOLLQ8N9W6 283 aaKnown RBP13.5□□□□□ -0.25
NR1H3-227ENST00000498548 PAPD5Q8NDF8 572 aaKnown RBP13.5□□□□□ -0.25
NR1H3-227ENST00000498548 BBS1Q8NFJ9 593 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 OR56B2PQ8NGI1 322 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 NANPQ8TBE9 248 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 C22orf15Q8WYQ4 148 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 NTN4Q9HB63 628 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 BRD7Q9NPI1 651 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 DNAJB9Q9UBS3 223 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 DOCK11Q5JSL3 2073 aa13.5□□□□□ -0.25
NR1H3-227ENST00000498548 PPIAL4EA0A075B759 164 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 PPIAL4DF5H284 164 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 PPIAL4FP0DN26 164 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 IRF2P14316 349 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 RPS2P15880 293 aaKnown RBP13.49□□□□□ -0.25
NR1H3-227ENST00000498548 BLVRAP53004 296 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 RAD23AP54725 363 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 GRB2P62993 217 aaKnown RBP13.49□□□□□ -0.25
NR1H3-227ENST00000498548 BNIP1Q12981 228 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 ZNF154Q13106 437 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 ESCO2Q56NI9 601 aa13.49□□□□□ -0.25
NR1H3-227ENST00000498548 FAM57BQ71RH2 274 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 239.8 ms