RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ZNF181Q2M3W8 571 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 SNAI3Q3KNW1 292 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 ESCO2Q56NI9 601 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 DRAM2Q6UX65 266 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 TREML4Q6UXN2 200 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 CD300LDQ6UXZ3 194 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 USP43Q70EL4 1123 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 MOGAT3Q86VF5 341 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 ADGRG5Q8IZF4 528 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 CELF2-AS1Q8N7Q2 184 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF511Q8NB15 262 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 SEMA6DQ8NFY4 1073 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 OR6K6Q8NGW6 343 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 GIPC3Q8TF64 312 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 ZFAND2BQ8WV99 257 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 SPRYD4Q8WW59 207 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 SLAMF6Q96DU3 332 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 FEVQ99581 238 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 COPS4Q9BT78 406 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 CHID1Q9BWS9 393 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 NMNAT2Q9BZQ4 307 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 CMC2Q9NRP2 79 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 CENPMQ9NSP4 180 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 LRCH1Q9Y2L9 728 aa7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 POLR3KQ9Y2Y1 108 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 NOP16Q9Y3C1 178 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-207ENST00000498212 DHRS12A0PJE2 317 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ARRDC5A6NEK1 342 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 GGT3PA6NGU5 568 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 AQP12BA6NM10 295 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 A8MXK9 166 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 TRAPPC2LH3BP13 241 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 GYG2O15488 501 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF205O95201 554 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 WNT2P09544 360 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 IRF2P14316 349 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 RPS2P15880 293 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF12P17014 697 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 HOXB6P17509 224 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 CPT2P23786 658 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 GRK5P34947 590 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 CD200P41217 278 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 GATA4P43694 442 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 PRKXP51817 358 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 HILS1P60008 231 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 GRB2P62993 217 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF92Q03936 586 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF154Q13106 437 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 MAB21L1Q13394 359 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 EIF2B1Q14232 305 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OR8G1Q15617 311 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 PCK2Q16822 640 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ZNF404Q494X3 552 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ARMCX4Q5H9R4 360 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 TEX30Q5JUR7 227 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 GLYATL3Q5SZD4 288 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 TRPM8Q7Z2W7 1104 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 AQP12AQ8IXF9 295 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 BPIFB2Q8N4F0 458 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OR6N2Q8NGY6 317 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OR2AE1Q8NHA4 323 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 BCAS4Q8TDM0 211 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 CANT1Q8WVQ1 401 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 ERGIC1Q969X5 290 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OTULINQ96BN8 352 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 JMJD8Q96S16 334 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 KCNJ15Q99712 375 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 MRI1Q9BV20 369 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 SSBP3Q9BWW4 388 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 SUCNR1Q9BXA5 334 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OPA3Q9H6K4 179 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 TMEM165Q9HC07 324 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 MMP26Q9NRE1 261 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 PDP1Q9P0J1 537 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 MIOXQ9UGB7 285 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OR5V1Q9UGF6 321 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 OPN4Q9UHM6 478 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 AUP1Q9Y679 476 aa7.11□□□□□ -1.27
HMGXB4-207ENST00000498212 FAM183AA6NL82 134 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 CD300LBA8K4G0 201 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 TRIM77I1YAP6 450 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 TBX1O43435 398 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 XRCC2O43543 280 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 GMDSO60547 372 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 E2F6O75461 281 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 FSTL3O95633 263 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 FSHBP01225 129 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 SLC2A1P11166 492 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 PAICSP22234 425 aaKnown RBP7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 CA6P23280 308 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 ANOS1P23352 680 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 HSD11B1P28845 292 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 PMELP40967 661 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 SLC15A1P46059 708 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 CX3CR1P49238 355 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 GNB2P62879 340 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 FLOT2Q14254 428 aa7.1□□□□□ -1.27
HMGXB4-207ENST00000498212 DNAL1Q4LDG9 190 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms