RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SDR9C7Q8NEX9 313 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 OR2T33Q8NG76 320 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 OR52I1Q8NGK6 324 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF563Q8TA94 476 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 DPF1Q92782 380 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 EXTL1Q92935 676 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 NAT6Q93015 286 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MR1Q95460 341 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 YIPF6Q96EC8 236 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 KTI12Q96EK9 354 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 RNFT2Q96EX2 444 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 Q96MT0 163 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 GPR137Q96N19 417 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 SLC46A1Q96NT5 459 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 FOXN4Q96NZ1 517 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TAAR9Q96RI9 348 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 CITED2Q99967 270 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 TAPBPLQ9BX59 468 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 OR11A1Q9GZK7 315 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MKKSQ9NPJ1 570 aaPredicted RBP5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MGAT4CQ9UBM8 478 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 COPS7AQ9UBW8 275 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 UBQLN2Q9UHD9 624 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 IL17BQ9UHF5 180 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 FBXO4Q9UKT5 387 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 VDAC3Q9Y277 283 aa5.51□□□□□ -1.53
SSBP1-213ENST00000496622 MPDZO75970 2070 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 IGKV1D-42A0A075B6H8 117 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TRBV11-1A0A0K0K1C0 115 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 UNC119BA6NIH7 251 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 EFCAB9A8MZ26 197 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TSTD3H0UI37 97 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 H7C1C5 153 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 BHLHE40O14503 412 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 SMAD7O15105 426 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF264O43296 627 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 CSO75390 466 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 OR2J2O76002 312 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 CER1O95813 267 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TGFAP01135 160 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 IFNA7P01567 189 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 DNASE1P24855 282 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 IFNGR2P38484 337 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 MTNR1AP48039 350 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RGS6P49758 472 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 CDH11P55287 796 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 PKIAP61925 76 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 LCN6P62502 163 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 LTBQ06643 244 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 FABP9Q0Z7S8 132 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 BIKQ13323 160 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 CRMP1Q14194 572 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 PGGHGQ32M88 737 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 ULK3Q6PHR2 472 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 ANKRD37Q7Z713 158 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 KMT5CQ86Y97 462 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 BMPERQ8N8U9 685 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM163Q8TC26 289 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 GPR119Q8TDV5 335 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RASD2Q96D21 266 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 LRRC46Q96FV0 321 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 NMNAT3Q96T66 252 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 PRRT1Q99946 306 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 VPS25Q9BRG1 176 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 NKX6-2Q9C056 277 aaPredicted RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 POLR2J2Q9GZM3 115 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 PRO1933Q9H354 126 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM185BQ9H7F4 350 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 EXOSC4Q9NPD3 245 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RPS6KB2Q9UBS0 482 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 TESQ9UGI8 421 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 SLC6A5Q9Y345 797 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 A0A0A6YYH2 397 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 A0A1W2PNU3 283 aaPredicted RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 A6NJ64 397 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 AIREO43918 545 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 SAP30O75446 220 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 HIST1H1CP16403 213 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 NPR2P20594 1047 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 GSTM3P21266 225 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 GRPRP30550 384 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RPS19P39019 145 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 AQP2P41181 271 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 GAS1P54826 345 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 SNRPGP62308 76 aaKnown RBP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 DEFA5Q01523 94 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 MXD1Q05195 221 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 SPHARQ15513 63 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.5□□□□□ -1.53
SSBP1-213ENST00000496622 BAIAP2L2Q6UXY1 529 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RPTNQ6XPR3 784 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 COLCA1Q6ZS62 124 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 SLC29A4Q7RTT9 530 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 OVCH1Q7RTY7 1134 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 NAA40Q86UY6 237 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 RDH10Q8IZV5 341 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 OR52E2Q8NGJ4 325 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 OR2V1Q8NHB1 315 aa5.5□□□□□ -1.53
SSBP1-213ENST00000496622 DVL3Q92997 716 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms