RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 GFI1BQ5VTD9 330 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ZNF836Q6ZNA1 936 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ZNF615Q8N8J6 731 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 NUP43Q8NFH3 380 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 RNF128Q8TEB7 428 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 RAB39BQ96DA2 213 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 C16orf58Q96GQ5 468 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 GAL3ST2Q9H3Q3 398 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 RIMS4Q9H426 269 aaPredicted RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 OR5AC2Q9NZP5 309 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 MMP24Q9Y5R2 645 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 FRYLO94915 3013 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 A0A0A6YYD5 115 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 TMEM202A6NGA9 273 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SHISA7A6NL88 538 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 OR2AG2A6NM03 316 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 K7ERQ8 282 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 RTCAO00442 366 aaKnown RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 SMAD9O15198 467 aaKnown RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 NDUFS4O43181 175 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 PRICKLE3O43900 615 aaPredicted RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 NDUFB2O95178 105 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SFT2D2O95562 160 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 TRGC2P03986 189 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 APODP05090 189 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ZNF28P17035 718 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 FUT1P19526 365 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 CSNK2A2P19784 350 aaPredicted RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 CTHP32929 405 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 GLIPR1P48060 266 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SOX2P48431 317 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SEC13P55735 322 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 POLR2LP62875 67 aaKnown RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 SLC35A1P78382 337 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 PDGFRLQ15198 375 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 TTLL10Q6ZVT0 673 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SLC16A9Q7RTY1 509 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 DTWD2Q8NBA8 298 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 PLPP5Q8NEB5 264 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ZNF563Q8TA94 476 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ADAMTS15Q8TE58 950 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 TMEM106AQ96A25 262 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 NMNAT2Q9BZQ4 307 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 OR2AG1Q9H205 316 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SLC26A1Q9H2B4 701 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ADAP2Q9NPF8 381 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 PLA2G2EQ9NZK7 142 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 FRRS1LQ9P0K9 344 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 OR4C45A6NMZ5 311 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ARPC3O15145 178 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 CDC14BO60729 498 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 CXCL1P09341 107 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 TAGLN2P37802 199 aaKnown RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 NPY4RP50391 375 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 TSTA3Q13630 321 aaPredicted RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 MLF2Q15773 248 aaPredicted RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 RIPPLY2Q5TAB7 128 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ABLIM2Q6H8Q1 611 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ASTLQ6HA08 431 aaPredicted RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 OR4C11Q6IEV9 310 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 RFLNAQ6ZTI6 216 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 RCBTB1Q8NDN9 531 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 OR52E1Q8NGJ3 308 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 OR51A7Q8NH64 312 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ABHD5Q8WTS1 349 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 TAAR8Q969N4 342 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 MRGPRFQ96AM1 343 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ANKRD9Q96BM1 317 aaPredicted RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 KTI12Q96EK9 354 aaPredicted RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 LRFN1Q9P244 771 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 VAX2Q9UIW0 290 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 WDR45Q9Y484 360 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 TRAV27A0A087WT01 109 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 BORCS7-ASMTA0A0B4J1R7 106 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 MTX2O75431 263 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 SCGNO76038 276 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 DBIP07108 87 aaKnown RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 HIST1H1CP16403 213 aaKnown RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 AKR1C4P17516 323 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 AFF3P51826 1226 aaKnown RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
HPS4-217ENST00000496385 PMPCAQ10713 525 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 CEBPEQ15744 281 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ARHGAP11BQ3KRB8 267 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 TMEM35AQ53FP2 167 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ZNF627Q7L945 461 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 C17orf64Q86WR6 236 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 HOGA1Q86XE5 327 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 ZNF101Q8IZC7 436 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 JAGN1Q8N5M9 183 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 EXD3Q8N9H8 876 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 POC1AQ8NBT0 407 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 OR14K1Q8NGZ2 314 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 FAM3CQ92520 227 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 DTD2Q96FN9 168 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 MRGPRX4Q96LA9 322 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 Q96M85 177 aa8.11□□□□□ -1.11
HPS4-217ENST00000496385 TNFRSF13CQ96RJ3 184 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms