RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 IKZF2Q9UKS7 526 aa8.36□□□□□ -1.07
CALD1-223ENST00000496024 ZDHHC8Q9ULC8 765 aa8.36□□□□□ -1.07
CALD1-223ENST00000496024 LRP12Q9Y561 859 aa8.36□□□□□ -1.07
CALD1-223ENST00000496024 IGHV1-69-2A0A0G2JMI3 117 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 IGHV3-64DA0A0J9YX35 117 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 GGT3PA6NGU5 568 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 PRR32B1ATL7 298 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 ZNF670-ZNF695F2Z2N8 137 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 H0YL77 283 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 PPIHO43447 177 aaKnown RBP8.35□□□□□ -1.07
CALD1-223ENST00000496024 ENTPD6O75354 484 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 APOC1P02654 83 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 HLA-DPB1P04440 258 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 SELEP16581 610 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 TNFSF4P23510 183 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 PEX2P28328 305 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 HTR1FP30939 366 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 ATP6V1E1P36543 226 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 RBMXP38159 391 aaKnown RBP8.35□□□□□ -1.07
CALD1-223ENST00000496024 LIPAP38571 399 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 CDK5R2Q13319 367 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 KCTD18Q6PI47 426 aaPredicted RBP8.35□□□□□ -1.07
CALD1-223ENST00000496024 BIVMQ86UB2 503 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 OR8G5Q8NG78 346 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 OR10H4Q8NGA5 316 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 OR10AD1Q8NGE0 317 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 CCL17Q92583 94 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 APOL4Q9BPW4 351 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 BPESC1Q9GZL8 116 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 NARFLQ9H6Q4 476 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 ADGRL4Q9HBW9 690 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 ZNF275Q9NSD4 429 aaPredicted RBP8.35□□□□□ -1.07
CALD1-223ENST00000496024 FAM118AQ9NWS6 357 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 NKIRAS2Q9NYR9 191 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 CGGBP1Q9UFW8 167 aaPredicted RBP8.35□□□□□ -1.07
CALD1-223ENST00000496024 WARS2Q9UGM6 360 aaKnown RBP8.35□□□□□ -1.07
CALD1-223ENST00000496024 GTF2A1LQ9UNN4 478 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 CACNG2Q9Y698 323 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 TMEM14AQ9Y6G1 99 aa8.35□□□□□ -1.07
CALD1-223ENST00000496024 NIPBLQ6KC79 2804 aaeCLIP8.35□□□□□ -1.07
CALD1-223ENST00000496024 HIVEP2P31629 2446 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ZFHX3Q15911 3703 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 IGHV4-61A0A0C4DH41 118 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 LOC100130705A0A1B0GUX0 176 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 LRP5LA4QPB2 252 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 CD300LBA8K4G0 201 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 IQCF6A8MYZ5 107 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 VWC2LB2RUY7 222 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 NDUFS8O00217 210 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 SBK2P0C263 348 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ACHEP22303 614 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 USF1P22415 310 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 CA6P23280 308 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 CRYBB2P43320 205 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 GPR6P46095 362 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 CXCR4P61073 352 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 RIN1Q13671 783 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 FAM209AQ5JX71 171 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 AVPI1Q5T686 147 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ZNF322Q6U7Q0 402 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 PLEKHG7Q6ZR37 379 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ZNF771Q7L3S4 317 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 ZNF540Q8NDQ6 660 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ZNF555Q8NEP9 628 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 OR13G1Q8NGZ3 307 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ITLN1Q8WWA0 313 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 TRUB1Q8WWH5 349 aaKnown RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 CYGBQ8WWM9 190 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 ASB17Q8WXJ9 295 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 DVL3Q92997 716 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 RFKQ969G6 155 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 SGK3Q96BR1 496 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 REEP6Q96HR9 211 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 OR2V2Q96R30 315 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 OR8B4Q96RC9 309 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 REPIN1Q9BWE0 567 aaKnown RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 MROQ9BYG7 248 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 OR10A2Q9H208 303 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 SP140LQ9H930 580 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 CHODLQ9H9P2 273 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 TMEM100Q9NV29 134 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 CLN6Q9NWW5 311 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 SMPD3Q9NY59 655 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 ZNF319Q9P2F9 582 aa8.34□□□□□ -1.07
CALD1-223ENST00000496024 NKX1-2Q9UD57 310 aaPredicted RBP8.34□□□□□ -1.07
CALD1-223ENST00000496024 MALRD1Q5VYJ5 2156 aa8.34□□□□□ -1.08
CALD1-223ENST00000496024 A0A096LNT2 108 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 TMEM269A0A1B0GVZ9 245 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 E9PQ18 207 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 F5H5P2 479 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 DLGAP1O14490 977 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 MLNRO43193 412 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 XRCC2O43543 280 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 RP2O75695 350 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 CLIC3O95833 236 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 GIFP27352 417 aa8.33□□□□□ -1.08
CALD1-223ENST00000496024 RIDAP52758 137 aaKnown RBP8.33□□□□□ -1.08
CALD1-223ENST00000496024 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
CALD1-223ENST00000496024 SNRPGP62308 76 aaKnown RBP8.33□□□□□ -1.08
CALD1-223ENST00000496024 MVKQ03426 396 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms