RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 IFNA14P01570 189 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 MUC1P15941 1255 aaPredicted RBP10.98□□□□□ -0.65
COL1A1-209ENST00000495677 ECH1Q13011 328 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 MALLQ13021 153 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 GPR139Q6DWJ6 353 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 TMPRSS11FQ6ZWK6 438 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 NDUFA11Q86Y39 141 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 NRMQ8IXM6 262 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 C11orf44Q8N8P7 122 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 OR4F17Q8NGA8 305 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 OR4C13Q8NGP0 309 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 ST8SIA4Q92187 359 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 SLCO4A1Q96BD0 722 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 ZNF570Q96NI8 536 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 OR4F4Q96R69 305 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 RNPEPL1Q9HAU8 725 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 RAB18Q9NP72 206 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 PRPF19Q9UMS4 504 aaKnown RBP10.98□□□□□ -0.65
COL1A1-209ENST00000495677 AURKCQ9UQB9 309 aa10.98□□□□□ -0.65
COL1A1-209ENST00000495677 CD300LBA8K4G0 201 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 K7EIL1 84 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 PPP1R3DO95685 299 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 CA6P23280 308 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 SDHAP31040 664 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 SAA4P35542 130 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 RPL4P36578 427 aaKnown RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 MZT1Q08AG7 82 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 C11orf87Q6NUJ2 197 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 SLC36A1Q7Z2H8 476 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 NAA40Q86UY6 237 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 MICU2Q8IYU8 434 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 BOLLQ8N9W6 283 aaKnown RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 OR13C2Q8NGS9 318 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 SPRYD4Q8WW59 207 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 ACOT11Q8WXI4 607 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 ITPKCQ96DU7 683 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 GPX7Q96SL4 187 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 SSX3Q99909 188 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 DCTN5Q9BTE1 182 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 NUAK2Q9H093 628 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 MMP28Q9H239 520 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 NRIP3Q9NQ35 241 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 SIRT7Q9NRC8 400 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 MRPL15Q9P015 296 aaKnown RBP10.97□□□□□ -0.65
COL1A1-209ENST00000495677 ONECUT1Q9UBC0 465 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 RPS6KA6Q9UK32 745 aa10.97□□□□□ -0.65
COL1A1-209ENST00000495677 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 H3BUX3 64 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 CDC42EP2O14613 210 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 ANGPT2O15123 496 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 PTP4A3O75365 173 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 MPIG6BO95866 241 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 MDH1P40925 334 aaKnown RBP10.96□□□□□ -0.65
COL1A1-209ENST00000495677 TGM4P49221 684 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 SELENOWP63302 87 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 NFYCQ13952 458 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 TRAM2Q15035 370 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 MICBQ29980 383 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 ATPAF1Q5TC12 328 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-209ENST00000495677 OTPQ5XKR4 325 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 NCR3LG1Q68D85 454 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 NANOGP8Q6NSW7 305 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 LIAT1Q6ZQX7 453 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 TSEN54Q7Z6J9 526 aaKnown RBP10.96□□□□□ -0.65
COL1A1-209ENST00000495677 ADCK1Q86TW2 530 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 OFCC1Q8IZS5 231 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 PAPD5Q8NDF8 572 aaKnown RBP10.96□□□□□ -0.65
COL1A1-209ENST00000495677 SLC7A13Q8TCU3 470 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 WIPF2Q8TF74 440 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-209ENST00000495677 STON2Q8WXE9 905 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 SH3GL1Q99961 368 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 ADAT1Q9BUB4 502 aaKnown RBP10.96□□□□□ -0.65
COL1A1-209ENST00000495677 NDEL1Q9GZM8 345 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 TOR3AQ9H497 397 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 C1orf123Q9NWV4 160 aa10.96□□□□□ -0.65
COL1A1-209ENST00000495677 DNAH9Q9NYC9 4486 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 A0A087WUU8 490 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 MEGF11A6BM72 1044 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 F5H5K5 113 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 M0R1W7 72 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 FBXO24O75426 580 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 TXNDC12O95881 172 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 LCATP04180 440 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 CRABP1P29762 137 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 PRSS12P56730 875 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 KRR1Q13601 381 aaKnown RBP10.95□□□□□ -0.66
COL1A1-209ENST00000495677 ERICH5Q6P6B1 374 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 ZNF826PQ6ZT77 177 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 MBOAT2Q6ZWT7 520 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 MRPL21Q7Z2W9 205 aaKnown RBP10.95□□□□□ -0.66
COL1A1-209ENST00000495677 C11orf53Q8IXP5 236 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 Q8N2B8 174 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 FGFRL1Q8N441 504 aa10.95□□□□□ -0.66
COL1A1-209ENST00000495677 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
COL1A1-209ENST00000495677 R3HDM4Q96D70 268 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms