RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 A6NLC8 198 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 G3V4G9 280 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 FXYD1O00168 92 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 DVL1O14640 695 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 IMPA2O14732 288 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 FFAR1O14842 300 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 PIN1P1O15428 100 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 OR10H3O60404 316 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 ZNF26P17031 533 aaPredicted RBP11.76□□□□□ -0.53
VARS-228ENST00000495010 EEF1B2P24534 225 aaKnown RBP11.76□□□□□ -0.53
VARS-228ENST00000495010 GGT2P36268 569 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
VARS-228ENST00000495010 TPTEP56180 551 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 MZT1Q08AG7 82 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 COX10Q12887 443 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 MAPRE2Q15555 327 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 C11orf91Q3C1V1 193 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 SLC36A3Q495N2 470 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 CDONQ4KMG0 1287 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 IFI44LQ53G44 452 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 PTCHD4Q6ZW05 846 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 LINC00346Q8IVM7 164 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 CMTM4Q8IZR5 234 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 GALNT4Q8N4A0 578 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 PLPP7Q8NBV4 271 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 NPRL2Q8WTW4 380 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 ATF6BQ99941 703 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 SRA1Q9HD15 236 aaKnown RBP11.76□□□□□ -0.53
VARS-228ENST00000495010 MRGBPQ9NV56 204 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 VPREB3Q9UKI3 123 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 SIGLEC7Q9Y286 467 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 KPTNQ9Y664 436 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 PRKDCP78527 4128 aaKnown RBP11.76□□□□□ -0.53
VARS-228ENST00000495010 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 CD300LBA8K4G0 201 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 GSTA4O15217 222 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 TSPAN9O75954 239 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 PAHP00439 452 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 HLA-DQA2P01906 255 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 GRPP07492 148 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 CDKN2AP42771 156 aaKnown RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 TRAP1Q12931 704 aaKnown RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 FAM189A2Q15884 450 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 BEAN1Q3B7T3 259 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 DPY19L2P2Q6ZN68 376 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 REC114Q7Z4M0 266 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 SPERTQ8NA61 448 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 RSRC1Q96IZ7 334 aaKnown RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 ATP6V1G3Q96LB4 118 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 TSSK2Q96PF2 358 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 GPX7Q96SL4 187 aaPredicted RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 KRCC1Q9NPI7 259 aaPredicted RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
VARS-228ENST00000495010 B9D1Q9UPM9 204 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
VARS-228ENST00000495010 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
VARS-228ENST00000495010 PTP4A3O75365 173 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 RENP00797 406 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 HERPUD1Q15011 391 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 RSPO1Q2MKA7 263 aaPredicted RBP11.74□□□□□ -0.53
VARS-228ENST00000495010 CFAP77Q6ZQR2 320 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 TSEN54Q7Z6J9 526 aaKnown RBP11.74□□□□□ -0.53
VARS-228ENST00000495010 NAA40Q86UY6 237 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 OR5R1Q8NH85 324 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 SPTSSAQ969W0 71 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 ERMAPQ96PL5 475 aaPredicted RBP11.74□□□□□ -0.53
VARS-228ENST00000495010 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
VARS-228ENST00000495010 C14orf119Q9NWQ9 140 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 ZNRD1Q9P1U0 126 aa11.74□□□□□ -0.53
VARS-228ENST00000495010 FAM32AQ9Y421 112 aaKnown RBP11.74□□□□□ -0.53
VARS-228ENST00000495010 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 LOC100653049A0A140TA62 436 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 UNC119BA6NIH7 251 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 M0R135 149 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 DCTN6O00399 190 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 KRT34O76011 436 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 PPP1R3DO95685 299 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 TXNDC12O95881 172 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 PRB2P02812 416 aaPredicted RBP11.73□□□□□ -0.53
VARS-228ENST00000495010 OPN1MWP04001 364 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 TROVE2P10155 538 aaKnown RBP eCLIP11.73□□□□□ -0.53
VARS-228ENST00000495010 GABRA5P31644 462 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 GRK5P34947 590 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 POU4F2Q12837 409 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 KRTAP27-1Q3LI81 207 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 FGD3Q5JSP0 725 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 SLC35E4Q6ICL7 350 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 SLC18B1Q6NT16 456 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 SLC7A13Q8TCU3 470 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 ZNF799Q96GE5 643 aa11.73□□□□□ -0.53
VARS-228ENST00000495010 HSH2DQ96JZ2 352 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms