RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZNF584Q8IVC4 421 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 TTC9BQ8N6N2 239 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF433Q8N7K0 673 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 HAS2Q92819 552 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 DVL3Q92997 716 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 AIF1LQ9BQI0 150 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 C20orf141Q9NUB4 165 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 FBXL17Q9UF56 701 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 CDV3Q9UKY7 258 aaKnown RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SRPK3Q9UPE1 567 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 NOD1Q9Y239 953 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MED31Q9Y3C7 131 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 SCN2AQ99250 2005 aa4.29□□□□□ -1.72
PRKD3-210ENST00000494667 MYO10Q9HD67 2058 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 A0A1B0GU03 582 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM235A6NFC5 223 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 A8MVM7 634 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 M0QYG6 137 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TMPRSS11DO60235 418 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CTSVO60911 334 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CLEC3AO75596 197 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TNFSF13O75888 250 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SYNGR4O95473 234 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NTN1O95631 604 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 HPRT1P00492 218 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 HMGN2P05204 90 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 DBIP07108 87 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 UMODP07911 640 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TDGF1P13385 188 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 FOSL2P15408 326 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TMEM11P17152 192 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR10J1P30954 320 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RPL4P36578 427 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 EIF3IQ13347 325 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 AGERQ15109 404 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR1Q1Q15612 314 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CCSMST1Q4G0I0 132 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NBPF12Q5TAG4 269 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 KIRREL2Q6UWL6 708 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NUFIP2Q7Z417 695 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 LRRTM4Q86VH4 590 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SLC35G3Q8N808 338 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 ADAD2Q8NCV1 583 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CPEB3Q8NE35 698 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR2M7Q8NG81 312 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 C4orf45Q96LM5 186 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NUDT9Q9BW91 350 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 C11orf1Q9H5F2 150 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 EML5Q05BV3 1969 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TGIF2-C20orf24A0A0A6YYL0 155 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RBFOX3A6NFN3 312 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 WIPF3A6NGB9 483 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NDUFB2O95178 105 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CTSHP09668 335 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SLC35G6P0C7Q6 338 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CD82P27701 267 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SERPINA4P29622 427 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RPL12P30050 165 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 APLNRP35414 380 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 APOBEC1P41238 236 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SGSHP51688 502 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 UBE2NP61088 152 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 FAM98CQ17RN3 349 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 AKIRIN2Q53H80 203 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TEX38Q6PEX7 206 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CFAP52Q8N1V2 620 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CYB561A3Q8NBI2 242 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR51D1Q8NGF3 324 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR14K1Q8NGZ2 314 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 PFN4Q8NHR9 129 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SLC25A43Q8WUT9 341 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RBMXL1Q96E39 390 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF681Q96N22 645 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 OR2M4Q96R27 311 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SLC22A12Q96S37 553 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 PAAF1Q9BRP4 392 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SPON2Q9BUD6 331 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 PCBD2Q9H0N5 130 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 PLK3Q9H4B4 646 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 GPR35Q9HC97 309 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 SLC2A9Q9NRM0 540 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 P4HTMQ9NXG6 502 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 ZNF346Q9UL40 294 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 POLR3KQ9Y2Y1 108 aaPredicted RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 BORCS7-ASMTA0A0B4J1R7 106 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 EEF1E1-BLOC1S5C9J1V9 151 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 CLDN34H7C241 214 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NFKBIEO00221 500 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NDUFS4O43181 175 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 GPR137BO60478 399 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 ELFN1P0C7U0 828 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 FGF5P12034 268 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 NID1P14543 1247 aa4.28□□□□□ -1.72
PRKD3-210ENST00000494667 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 AFF3P51826 1226 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 RPS24P62847 133 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 ZFP36L1Q07352 338 aaKnown RBP4.28□□□□□ -1.72
PRKD3-210ENST00000494667 PRSS8Q16651 343 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms