RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ADAM20O43506 726 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 MELTFP08582 738 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 SLC6A6P31641 620 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 PYCR1P32322 319 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 GATA4P43694 442 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 PSME3P61289 254 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 SPIBQ01892 262 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 POU4F2Q12837 409 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 OR8B8Q15620 311 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 RFX4Q33E94 735 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 SNAI3Q3KNW1 292 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 SLC35F1Q5T1Q4 408 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 GLYATQ6IB77 296 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 LYPD4Q6UWN0 246 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 ZNF826PQ6ZT77 177 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 OR2AJ1Q8NGZ0 328 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 OR4F5Q8NH21 305 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 Q8TCH9 128 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 MAP6Q96JE9 813 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 C7orf34Q96L11 122 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 CCT8L2Q96SF2 557 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 TBX15Q96SF7 602 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 FUZQ9BT04 418 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 BEX1Q9HBH7 125 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 SMURF1Q9HCE7 757 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 KRCC1Q9NPI7 259 aaPredicted RBP10.49□□□□□ -0.73
SKA1-205ENST00000494518 PNRC2Q9NPJ4 139 aaKnown RBP10.49□□□□□ -0.73
SKA1-205ENST00000494518 MRPL22Q9NWU5 206 aaKnown RBP10.49□□□□□ -0.73
SKA1-205ENST00000494518 RNF7Q9UBF6 113 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 MMP24Q9Y5R2 645 aa10.49□□□□□ -0.73
SKA1-205ENST00000494518 IGHV3OR15-7A0A075B7D8 119 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 CENPVL3A0A0U1RRI6 287 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 A0A1B0GWJ7 208 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 OR6C68A6NDL8 312 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 TVP23AA6NH52 213 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 CD300LBA8K4G0 201 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 ZNF879B4DU55 563 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 M0R135 149 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 TOX4O94842 621 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 GYPAP02724 150 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 GRPP07492 148 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 PSKH1P11801 424 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 CPT2P23786 658 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 NOS3P29474 1203 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 GGT2P36268 569 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 PSMB10P40306 273 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 KRTAP10-3P60369 221 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 ZNF92Q03936 586 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 KRT72Q14CN4 511 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 SLC36A3Q495N2 470 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 OLFML2AQ68BL7 652 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 Q6YL49 198 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 FGFRL1Q8N441 504 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 CYB561A3Q8NBI2 242 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 LHX4Q969G2 390 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 ZNF799Q96GE5 643 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 DHRS1Q96LJ7 313 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 FN3KRPQ9HA64 309 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 EFCAB1Q9HAE3 211 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 C1orf123Q9NWV4 160 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 ERVK-18Q9QC07 812 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 CYB5R1Q9UHQ9 305 aa10.48□□□□□ -0.73
SKA1-205ENST00000494518 hCG_1807616A0A1W2PRN6 198 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 GGT3PA6NGU5 568 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 A6NLC8 198 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 LGALS8O00214 317 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 P2RY10O00398 339 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 OR10H3O60404 316 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 FCN3O75636 299 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 GADD45GO95257 159 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 SLC2A1P11166 492 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 MMP9P14780 707 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 TPTEP56180 551 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 ARF6P62330 175 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 ELF3P78545 371 aaPredicted RBP10.47□□□□□ -0.73
SKA1-205ENST00000494518 PRB3Q04118 309 aaPredicted RBP10.47□□□□□ -0.73
SKA1-205ENST00000494518 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.47□□□□□ -0.73
SKA1-205ENST00000494518 ECH1Q13011 328 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 GLYATL3Q5SZD4 288 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 ZBTB46Q86UZ6 589 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 CELF2-AS1Q8N7Q2 184 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 OR51L1Q8NGJ5 315 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 ERGIC1Q969X5 290 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 WDFY2Q96P53 400 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 PRDM13Q9H4Q3 707 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 NOX4Q9NPH5 578 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 DCAF13Q9NV06 445 aaKnown RBP10.47□□□□□ -0.73
SKA1-205ENST00000494518 ADA2Q9NZK5 511 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 KIF17Q9P2E2 1029 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 ABCD2Q9UBJ2 740 aa10.47□□□□□ -0.73
SKA1-205ENST00000494518 SAMD4AQ9UPU9 718 aaKnown RBP10.47□□□□□ -0.73
SKA1-205ENST00000494518 A0A0U1RQK1 487 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 A0A1B0GW55 424 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 CLPSL1A2RUU4 121 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 ARPC3O15145 178 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 FSTL3O95633 263 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 IGHV4-59P01825 116 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 DUX4L2P0CJ85 424 aa10.46□□□□□ -0.73
SKA1-205ENST00000494518 DUX4L3P0CJ86 424 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms