RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ASRGL1Q7L266 308 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 BCDIN3DQ7Z5W3 292 aaKnown RBP12.41□□□□□ -0.42
ATG4B-224ENST00000494132 OR13G1Q8NGZ3 307 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 SPRYD4Q8WW59 207 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-224ENST00000494132 PYDC1Q8WXC3 89 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 MEGF10Q96KG7 1140 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 SLC30A2Q9BRI3 323 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 TTTY10Q9BZA0 68 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 MARCH7Q9H992 704 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 BRD7Q9NPI1 651 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 KRT84Q9NSB2 600 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 IL19Q9UHD0 177 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 TMEFF2Q9UIK5 374 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-224ENST00000494132 PPP1R3CQ9UQK1 317 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 GGT3PA6NGU5 568 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 SAC3D1A6NKF1 404 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 B4DSR2 109 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 PRKYO43930 277 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
ATG4B-224ENST00000494132 IGHV2-5P01817 119 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 MRPL3P09001 348 aaKnown RBP12.4□□□□□ -0.42
ATG4B-224ENST00000494132 SBK2P0C263 348 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 FAM157CP0CG43 387 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 SLC2A5P22732 501 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 HCCSP53701 268 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 APOFQ13790 326 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 GFOD2Q3B7J2 385 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 GLCCI1Q86VQ1 547 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 THEM6Q8WUY1 208 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 SIGLEC11Q96RL6 698 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 GCM1Q9NP62 436 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 TMEM100Q9NV29 134 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 HIF1ANQ9NWT6 349 aa12.4□□□□□ -0.42
ATG4B-224ENST00000494132 CD300LBA8K4G0 201 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 PSMD9O00233 223 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 PRODHO43272 600 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 IGHV2-70P01814 119 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 MSMBP08118 114 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 SRD5A1P18405 259 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 CA6P23280 308 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 SLC15A1P46059 708 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 DVL1P1P54792 670 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 HOXA4Q00056 320 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 SRSF2Q01130 221 aaKnown RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 SLC3A1Q07837 685 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 KPNB1Q14974 876 aaKnown RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 ZMYND11Q15326 602 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 FAM201AQ5SY85 155 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 PRAMEF6Q5VXH4 476 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 KDM4DQ6B0I6 523 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 FAM57BQ71RH2 274 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 SHFQ7M4L6 423 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 PEG10Q86TG7 708 aaKnown RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 MOGAT3Q86VF5 341 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 ZDHHC13Q8IUH4 622 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 PARP8Q8N3A8 854 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 OTOSQ8NHW6 89 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 RNF133Q8WVZ7 376 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 DNAJC9Q8WXX5 260 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 TMEM186Q96B77 213 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 RAB39BQ96DA2 213 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 DUS3LQ96G46 650 aaKnown RBP12.39□□□□□ -0.43
ATG4B-224ENST00000494132 MDFIQ99750 246 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 TEX12Q9BXU0 123 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 GABARAPL1Q9H0R8 117 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 LPAR3Q9UBY5 353 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 OAZ3Q9UMX2 235 aa12.39□□□□□ -0.43
ATG4B-224ENST00000494132 CCDC182A6NF36 153 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 PLPP2O43688 288 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 LYNP07948 512 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 H2BFMP0C1H6 154 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 FCGR1AP12314 374 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 HNF1AP20823 631 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
ATG4B-224ENST00000494132 ZNF121P58317 390 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-224ENST00000494132 ESRRGP62508 458 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 MAB21L1Q13394 359 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 TIGD6Q17RP2 521 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 LRRN1Q6UXK5 716 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 C19orf18Q8NEA5 215 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 OR56B2PQ8NGI1 322 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 OR51F2Q8NH61 342 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 CIB1Q99828 191 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 REPIN1Q9BWE0 567 aaKnown RBP12.38□□□□□ -0.43
ATG4B-224ENST00000494132 ZNF319Q9P2F9 582 aa12.38□□□□□ -0.43
ATG4B-224ENST00000494132 TMEM178BH3BS89 294 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 POLR2IP36954 125 aaKnown RBP12.37□□□□□ -0.43
ATG4B-224ENST00000494132 PMELP40967 661 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 OPRL1P41146 370 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 SEC61A1P61619 476 aaKnown RBP12.37□□□□□ -0.43
ATG4B-224ENST00000494132 BTG1P62324 171 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 LCN2P80188 198 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 OR8G1Q15617 311 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 SLC35D3Q5M8T2 416 aa12.37□□□□□ -0.43
ATG4B-224ENST00000494132 SLX4IPQ5VYV7 408 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms