RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CCNB2O95067 398 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 IGHV3-11P01762 117 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 HLA-HP01893 362 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 CLTAP09496 248 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 ZNF688P0C7X2 276 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 PGA4P0DJD7 388 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 PGA3P0DJD8 388 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 CSNK2A2P19784 350 aaPredicted RBP1.88□□□□□ -2.11
SMC4-223ENST00000493695 EIF2S2P20042 333 aaKnown RBP1.88□□□□□ -2.11
SMC4-223ENST00000493695 GSTM3P21266 225 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 PFN2P35080 140 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 POLR2IP36954 125 aaKnown RBP1.88□□□□□ -2.11
SMC4-223ENST00000493695 NBL1P41271 181 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 FABP6P51161 128 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 CLDN18P56856 261 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 TAS2R31P59538 309 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 GBE1Q04446 702 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 IGFBP7Q16270 282 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 NKAIN4Q8IVV8 208 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 CBR4Q8N4T8 237 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 JAGN1Q8N5M9 183 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 RPEQ96AT9 228 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 PRRC1Q96M27 445 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 OPALINQ96PE5 141 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 CDX2Q99626 313 aaPredicted RBP1.88□□□□□ -2.11
SMC4-223ENST00000493695 RBBP8Q99708 897 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 GGTLC1Q9BX51 225 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 ELOVL6Q9H5J4 265 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 AGPAT4Q9NRZ5 378 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 SAR1BQ9Y6B6 198 aa1.88□□□□□ -2.11
SMC4-223ENST00000493695 TRAV25A0A0B4J276 109 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 CENPVL3A0A0U1RRI6 287 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 TSPAN11A1L157 253 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 NME4O00746 187 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 BCKDKO14874 412 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 CHST10O43529 356 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 NMT2O60551 498 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 IGLV3-25P01717 112 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 OR8G3PP0DMU2 310 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 RNASE2P10153 161 aaKnown RBP1.87□□□□□ -2.11
SMC4-223ENST00000493695 IL32P24001 234 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 CD70P32970 193 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 BMI1P35226 326 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 CACNG7P62955 275 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 SIGLEC14Q08ET2 396 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 DGCR6Q14129 220 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 PRR9Q5T870 116 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 FAM222AQ5U5X8 452 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 AP1ARQ63HQ0 302 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 EIF3MQ7L2H7 374 aaKnown RBP1.87□□□□□ -2.11
SMC4-223ENST00000493695 OFCC1Q8IZS5 231 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 CNPY4Q8N129 248 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 OR5AR1Q8NGP9 310 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 RMI2Q96E14 147 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 MTG1Q9BT17 334 aaPredicted RBP1.87□□□□□ -2.11
SMC4-223ENST00000493695 RSG1Q9BU20 258 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 SLC7A5P2Q9GIP4 190 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 VPS37BQ9H9H4 285 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 TMEM27Q9HBJ8 222 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 LYRM4Q9HD34 91 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 SLC39A1Q9NY26 324 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 TBC1D24Q9ULP9 559 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 COMMD3-BMI1R4GMX3 469 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 UBN2Q6ZU65 1347 aa1.87□□□□□ -2.11
SMC4-223ENST00000493695 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 TRAV19A0A0A6YYK7 116 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 SERTM2A0A1B0GWG4 89 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 ZBTB5O15062 677 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 CDC40O60508 579 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMC4-223ENST00000493695 FCN3O75636 299 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 CBR3O75828 277 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 FGF4P08620 206 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 IL1RNP18510 177 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 ME2P23368 584 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 HTR1DP28221 377 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 HMOX2P30519 316 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 MYCNOSP40205 109 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 PPIDQ08752 370 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 ART3Q13508 389 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 PNOCQ13519 176 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 SNRNP35Q16560 246 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 TRMT5Q32P41 509 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 BEX5Q5H9J7 111 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 TEX30Q5JUR7 227 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 TWF2Q6IBS0 349 aaKnown RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 WDR82Q6UXN9 313 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 C12orf54Q6X4T0 127 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 HORMAD1Q86X24 394 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 TMEM256Q8N2U0 113 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 SLC35G3Q8N808 338 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 TTLQ8NG68 377 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 OR4M1Q8NGD0 313 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 OR51E1Q8TCB6 317 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 RTN4IP1Q8WWV3 396 aaPredicted RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 HAUS1Q96CS2 278 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 JSRP1Q96MG2 331 aaPredicted RBP1.86□□□□□ -2.11
SMC4-223ENST00000493695 C18orf15Q96N68 181 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 TEKT3Q9BXF9 490 aa1.86□□□□□ -2.11
SMC4-223ENST00000493695 CALN1Q9BXU9 219 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms