RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 CA6P23280 308 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 GGT2P36268 569 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 KCNJ8Q15842 424 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 RFX4Q33E94 735 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 SLC36A3Q495N2 470 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 SFRP4Q6FHJ7 346 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-210ENST00000493682 MRPL21Q7Z2W9 205 aaKnown RBP14.41□□□□□ -0.1
COL9A1-210ENST00000493682 ZBTB46Q86UZ6 589 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 BOLLQ8N9W6 283 aaKnown RBP14.41□□□□□ -0.1
COL9A1-210ENST00000493682 OR2AJ1Q8NGZ0 328 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 OR4K13Q8NH42 304 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 FANK1Q8TC84 345 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 KCTD14Q9BQ13 255 aaPredicted RBP14.41□□□□□ -0.1
COL9A1-210ENST00000493682 FN3KRPQ9HA64 309 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 EFCAB1Q9HAE3 211 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 RPRD1BQ9NQG5 326 aaKnown RBP14.41□□□□□ -0.1
COL9A1-210ENST00000493682 KIF17Q9P2E2 1029 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 ERVK-18Q9QC07 812 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 POMT1Q9Y6A1 747 aa14.41□□□□□ -0.1
COL9A1-210ENST00000493682 CD300LBA8K4G0 201 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 C3orf80F5H4A9 247 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 SASH3O75995 380 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 PTBP3O95758 552 aaKnown RBP14.4□□□□□ -0.1
COL9A1-210ENST00000493682 LIPFP07098 398 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 SLC6A6P31641 620 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 BRICD5Q6PL45 260 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 ZNF620Q6ZNG0 422 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 FAM86B1Q8N7N1 296 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 SSMEM1Q8WWF3 244 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 GATAD2BQ8WXI9 593 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 WDFY2Q96P53 400 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 CCT8L2Q96SF2 557 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 SLC22A4Q9H015 551 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 OR52D1Q9H346 318 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 FN3KQ9H479 309 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 SMURF1Q9HCE7 757 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 NOP16Q9Y3C1 178 aaKnown RBP14.4□□□□□ -0.1
COL9A1-210ENST00000493682 CMYA5Q8N3K9 4069 aa14.4□□□□□ -0.1
COL9A1-210ENST00000493682 OR6C68A6NDL8 312 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 NDUFAB1O14561 156 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 ADAM20O43506 726 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 HLA-DQA2P01906 255 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 H2AFXP16104 143 aaPredicted RBP14.39□□□□□ -0.11
COL9A1-210ENST00000493682 TPTEP56180 551 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 KRTAP10-3P60369 221 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 ZNF92Q03936 586 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 KRT72Q14CN4 511 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 HACD2Q6Y1H2 254 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 RHOUQ7L0Q8 258 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 PNLDC1Q8NA58 520 aaKnown RBP14.39□□□□□ -0.11
COL9A1-210ENST00000493682 PLPP7Q8NBV4 271 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 MAP6Q96JE9 813 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 ADAT1Q9BUB4 502 aaKnown RBP14.39□□□□□ -0.11
COL9A1-210ENST00000493682 IFT27Q9BW83 186 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 RASSF4Q9H2L5 321 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 ACOXLQ9NUZ1 547 aa14.39□□□□□ -0.11
COL9A1-210ENST00000493682 DCAF13Q9NV06 445 aaKnown RBP14.39□□□□□ -0.11
COL9A1-210ENST00000493682 MRPL22Q9NWU5 206 aaKnown RBP14.39□□□□□ -0.11
COL9A1-210ENST00000493682 IGHV1-69DA0A0B4J2H0 117 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 M0QZ24 198 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 M0R135 149 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 GMDSO60547 372 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 IGHV1-69P01742 117 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 NUDT2P50583 147 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 RPL15P61313 204 aaKnown RBP14.38□□□□□ -0.11
COL9A1-210ENST00000493682 PDCD1Q15116 288 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 OR8B8Q15620 311 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 SNAI3Q3KNW1 292 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 METTL11BQ5VVY1 283 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 GLYATQ6IB77 296 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 TBC1D15Q8TC07 691 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 DYRK2Q92630 601 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 LHX4Q969G2 390 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 ZNF799Q96GE5 643 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 TRIM15Q9C019 465 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 SIRPDQ9H106 197 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 TRIM36Q9NQ86 728 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 ARGLU1Q9NWB6 273 aaPredicted RBP14.38□□□□□ -0.11
COL9A1-210ENST00000493682 ABCD2Q9UBJ2 740 aa14.38□□□□□ -0.11
COL9A1-210ENST00000493682 TRAV38-1A0A0B4J264 116 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 C5orf63A6NC05 138 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 OOEPA6NGQ2 149 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 NDUFA2O43678 99 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 FCN3O75636 299 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 GYPAP02724 150 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 ANOS1P23352 680 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 NOS3P29474 1203 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 SDR9C7Q8NEX9 313 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 OR2AE1Q8NHA4 323 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 SPTSSAQ969W0 71 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 MMP27Q9H306 513 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 C1orf123Q9NWV4 160 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 KCNG2Q9UJ96 466 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 SAMD4AQ9UPU9 718 aaKnown RBP14.37□□□□□ -0.11
COL9A1-210ENST00000493682 RNF114Q9Y508 228 aa14.37□□□□□ -0.11
COL9A1-210ENST00000493682 A0A0G2JK05 382 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 GGT3PA6NGU5 568 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 TIMM23O14925 209 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 IDH3BO43837 385 aa14.36□□□□□ -0.11
COL9A1-210ENST00000493682 GPR137BO60478 399 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms