RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 BOD1Q96IK1 185 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 LOXL4Q96JB6 756 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 GPR174Q9BXC1 333 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 SLC17A9Q9BYT1 436 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 E5RGE8 158 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF26H0Y7S4 382 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 EIF1AYO14602 144 aaKnown RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF11O60813 436 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 WDR1O75083 606 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 MT-CO2P00403 227 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 LINC00271P0C7V0 271 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 OR5H8P0DN80 308 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 TNFSF4P23510 183 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 PRSS3P35030 304 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 EIF1AXP47813 144 aaKnown RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 SULT1A2P50226 295 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 TAS2R43P59537 309 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ODF1Q14990 250 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 CSRP2Q16527 193 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF5Q5TYX0 476 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF6Q5VXH4 476 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 LEG1Q6P5S2 330 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF880Q6PDB4 577 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 MRPL52Q86TS9 123 aaKnown RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 TMPRSS12Q86WS5 348 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 TEX26Q8N6G2 289 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 SIRT6Q8N6T7 355 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 NECAP1Q8NC96 275 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 OR56A1Q8NGH5 318 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 OR2T27Q8NH04 317 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 FAM213BQ8TBF2 198 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM19Q96HH6 336 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM121BQ9BXQ6 578 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 DPH1Q9BZG8 443 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 KIR3DX1Q9H7L2 352 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 MED20Q9H944 212 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 MRPL17Q9NRX2 175 aaKnown RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 SIRT3Q9NTG7 399 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 LAMP3Q9UQV4 416 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 FCF1Q9Y324 198 aaKnown RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 DSPPQ9NZW4 1301 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 MSGN1A6NI15 193 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 F8VVB4 439 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 F8VWA3 439 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 IFNL4K9M1U5 179 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 RAB27BO00194 218 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 GPR182O15218 404 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ADH1BP00325 375 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 RAB40ALP0C0E4 278 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 JMJD7P0C870 316 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 FHITP49789 147 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 RPS13P62277 151 aaKnown RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 COL10A1Q03692 680 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 GAS6Q14393 721 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF101Q8IZC7 436 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ZSCAN4Q8NAM6 433 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-205ENST00000493587 RAB40AQ8WXH6 277 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 ERGIC1Q969X5 290 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 C1QTNF2Q9BXJ5 285 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 BET1LQ9NYM9 111 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 HSPB7Q9UBY9 170 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 VAX2Q9UIW0 290 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 SZT2Q5T011 3432 aa6.17□□□□□ -1.42
VPS13B-205ENST00000493587 KIR2DL5BA0A0G2JN68 375 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 KIR2DL5BA0A0G2JPC4 375 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 CASTOR2A6NHX0 329 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PPP5D1E7EU14 171 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 OR7C2O60412 319 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 GCM2O75603 506 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 STK16O75716 305 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PPP1R3DO95685 299 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 CYB5AP00167 134 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 PSG1P11464 419 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 GSTM3P21266 225 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF10P21506 573 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 MLF1P58340 268 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ARF3P61204 181 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ARF1P84077 181 aaKnown RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 CYCSP99999 105 aaKnown RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TP53I3Q53FA7 332 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SIRPB2Q5JXA9 342 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF770Q6IQ21 691 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF627Q7L945 461 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 KIR2DL5AQ8N109 375 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 OR6N2Q8NGY6 317 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 OR4X1Q8NH49 305 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 STT3BQ8TCJ2 826 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 VN1R17PQ8TDU5 208 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF296Q8WUU4 475 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TVP23CQ96ET8 276 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM56Q96MV1 263 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 SLC25A21Q9BQT8 299 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 UTP23Q9BRU9 249 aaKnown RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TIMM13Q9Y5L4 95 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM56-RWDD3S4R434 201 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 TRBV2A0A0J9YWF9 115 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 ARRDC5A6NEK1 342 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 A8MVM7 634 aa6.16□□□□□ -1.42
VPS13B-205ENST00000493587 M0R3H8 397 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms