RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ELMOD3Q96FG2 381 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 Q96MF0 132 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 TTTY10Q9BZA0 68 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 SLC22A4Q9H015 551 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 RGCCQ9H4X1 137 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 MOB1AQ9H8S9 216 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 SAP30LQ9HAJ7 183 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 ADGRL4Q9HBW9 690 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 PNRC2Q9NPJ4 139 aaKnown RBP6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 TMEM100Q9NV29 134 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 NKIRAS2Q9NYR9 191 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 ZNF391Q9UJN7 358 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 PURGQ9UJV8 347 aaKnown RBP6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 LRP12Q9Y561 859 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 HSPE1-MOB4S4R3N1 261 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 CSMD1Q96PZ7 3565 aa6.97□□□□□ -1.29
TM4SF1-204ENST00000493348 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 TMEM129A0AVI4 362 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 METTL15A6NJ78 407 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ACOD1A6NK06 481 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 CYSRT1A8MQ03 144 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 LOC110117498-PIK3R3F6TDL0 507 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 NDUFS8O00217 210 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 PSMD9O00233 223 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 RPP14O95059 124 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 APOL3O95236 402 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ATP6V1G2O95670 118 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 IGHV4-39P01824 125 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 MYL12AP19105 171 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 KITLGP21583 273 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 DDOSTP39656 456 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 SRP9P49458 86 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 HCCSP53701 268 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 PSMA6P60900 246 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ACTA2P62736 377 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ACTG2P63267 376 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 CCL8P80075 99 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 TNFAIP6P98066 277 aaPredicted RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 EFNB1P98172 346 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 SLC3A1Q07837 685 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 RAB40BQ12829 278 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 PSG7Q13046 419 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 HLXQ14774 488 aaPredicted RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 MST1LQ2TV78 715 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 HFEQ30201 348 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 BCL2L15Q5TBC7 163 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ZNF691Q5VV52 312 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 KCTD20Q7Z5Y7 419 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 THAP5Q7Z6K1 395 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 PEG10Q86TG7 708 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ACBD7Q8N6N7 88 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 CSNK2A3Q8NEV1 391 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 OR8G5Q8NG78 346 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 OR2Z1Q8NG97 314 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 OR10S1Q8NGN2 331 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 RHOXF1Q8NHV9 184 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 UBASH3BQ8TF42 649 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 TIMD4Q96H15 378 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 REEP6Q96HR9 211 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 SORCS2Q96PQ0 1159 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 HIST1H2AAQ96QV6 131 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 OR8B4Q96RC9 309 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 CXXC4Q9H2H0 198 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 Q9H521 79 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 MYEF2Q9P2K5 600 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 NKX1-2Q9UD57 310 aaPredicted RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 GNG8Q9UK08 70 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 RRP15Q9Y3B9 282 aaKnown RBP6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 SNX5Q9Y5X3 404 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 ITPR3Q14573 2671 aa6.96□□□□□ -1.3
TM4SF1-204ENST00000493348 LOC390937A0A1W2PQ73 354 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 A0A1W2PQL4 384 aaPredicted RBP6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 H0YJX3 145 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 FAM20BO75063 409 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 MTRF1O75570 445 aaKnown RBP6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 SULT1C4O75897 302 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 CLIC3O95833 236 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 HEXAP06865 529 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 DBTP11182 482 aaKnown RBP6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 PSKH1P11801 424 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 CD99P14209 185 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 IRF2P14316 349 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 SLC25A16P16260 332 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 OTX1P32242 354 aaPredicted RBP6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 DCTDP32321 178 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 VHLP40337 213 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 ROM1Q03395 351 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 ZNF91Q05481 1191 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 RIPK1Q13546 671 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 GK2Q14410 553 aaPredicted RBP6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 TESK1Q15569 626 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 OR8G1Q15617 311 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 SNAI3Q3KNW1 292 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 GLYATL3Q5SZD4 288 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 IZUMO2Q6UXV1 221 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 COLCA1Q6ZS62 124 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 NAA40Q86UY6 237 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 TGIF2LYQ8IUE0 185 aa6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 ZCCHC24Q8N2G6 241 aaKnown RBP6.95□□□□□ -1.3
TM4SF1-204ENST00000493348 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms