RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 TRAV17A0A0B4J275 112 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 M0R135 149 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 TFECO14948 347 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-216ENST00000492977 SYNGR3O43761 229 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 CTAG2O75638 210 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 CEACAM4O75871 244 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
PTPN7-216ENST00000492977 YES1P07947 543 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 B4GALT1P15291 398 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 ARSBP15848 533 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 CRYGSP22914 178 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 SLC6A9P48067 706 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 TPTEP56180 551 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 TAS2R20P59543 309 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 DEFB109BQ30KR1 87 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 RNFT1Q5M7Z0 435 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 DRAM2Q6UX65 266 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 Q6ZSR3 168 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 ASCL5Q7RTU5 278 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 MCEMP1Q8IX19 187 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 CDH26Q8IXH8 852 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 DRAXINQ8NBI3 349 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-216ENST00000492977 OR52H1Q8NGJ2 320 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 OR1F12Q8NHA8 337 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 PHF21AQ96BD5 680 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 WDYHV1Q96HA8 205 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 MARVELD1Q9BSK0 173 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 NLKQ9UBE8 527 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 CGGBP1Q9UFW8 167 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-216ENST00000492977 LIPGQ9Y5X9 500 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 DNAJC13O75165 2243 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
PTPN7-216ENST00000492977 TMEM272A0A1B0GTI8 110 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 MEIOCA2RUB1 952 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 OR6C6A6NF89 314 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 BOLA2-SMG1P6H3BVE0 249 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 ORC5O43913 435 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 GABRA1P14867 456 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 AP3S2P59780 193 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 PLA2G7Q13093 441 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 KRTAP27-1Q3LI81 207 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 DNM1P46Q6ZS02 220 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 SLC16A14Q7RTX9 510 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 SIAH3Q8IW03 269 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 OR14K1Q8NGZ2 314 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 C10orf35Q96D05 121 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 FAM71F1Q96KD3 344 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 METTL17Q9H7H0 456 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 GP6Q9HCN6 339 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 RBMX2Q9Y388 322 aaKnown RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 RHBDD3Q9Y3P4 386 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 CSAG2Q9Y5P2 127 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 KCNMB2Q9Y691 235 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 A0A0A6YYH2 397 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 GGT3PA6NGU5 568 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 A6NJ64 397 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF587BE7ETH6 402 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 LDLRAD4O15165 306 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 IGHG3P01860 377 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 GSTT2BP0CG30 244 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 TMIGD3P0DMS9 266 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF32P17041 273 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 RAB6AP20340 208 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 GDNFP39905 211 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 SRP9P49458 86 aaKnown RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 EFNB2P52799 333 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 PLA1AQ53H76 456 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 RSBN1Q5VWQ0 802 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF774Q6NX45 483 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 ADGRE4PQ86SQ3 457 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 AKAP14Q86UN6 197 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 OR52N4Q8NGI2 321 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 OR52I2Q8NH67 350 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 HPS1Q92902 700 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 CREB3L1Q96BA8 519 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 LYZL4Q96KX0 146 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 OR2H1Q9GZK4 316 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 SLC7A10Q9NS82 523 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 SPRR3Q9UBC9 169 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 V9GYS6 101 aa12.3□□□□□ -0.44
PTPN7-216ENST00000492977 RIF1Q5UIP0 2472 aaKnown RBP12.29□□□□□ -0.44
PTPN7-216ENST00000492977 CIB4A0PJX0 185 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 E9PLN8 166 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 MTRF1O75570 445 aaKnown RBP12.29□□□□□ -0.44
PTPN7-216ENST00000492977 DHRS3O75911 302 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 ALDOBP05062 364 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 ABOP16442 354 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 PSG4Q00888 419 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 SNTB2Q13425 540 aaKnown RBP12.29□□□□□ -0.44
PTPN7-216ENST00000492977 CARTPTQ16568 116 aa12.29□□□□□ -0.44
PTPN7-216ENST00000492977 RNASE12Q5GAN4 147 aaKnown RBP12.29□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF627Q7L945 461 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms