RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 UFSP2Q9NUQ7 469 aa15.4■□□□□ 0.06
CHD1L-209ENST00000492728 ARMC1Q9NVT9 282 aa15.4■□□□□ 0.06
CHD1L-209ENST00000492728 TRRAPQ9Y4A5 3859 aa15.4■□□□□ 0.06
CHD1L-209ENST00000492728 CD300LBA8K4G0 201 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 CCNB2O95067 398 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 SLC2A1P11166 492 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 ZNF823P16415 610 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 EGR1P18146 543 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 CA6P23280 308 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 TPTEP56180 551 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 MS4A2Q01362 244 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 PCK2Q16822 640 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 SPATS1Q496A3 300 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 ZNF841Q6ZN19 808 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 MRPL21Q7Z2W9 205 aaKnown RBP15.39■□□□□ 0.05
CHD1L-209ENST00000492728 DCXRQ7Z4W1 244 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 LNX2Q8N448 690 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 CELF2-AS1Q8N7Q2 184 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 ZNF511Q8NB15 262 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 OR2T4Q8NH00 348 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 TAF15Q92804 592 aaKnown RBP eCLIP15.39■□□□□ 0.05
CHD1L-209ENST00000492728 NEIL1Q96FI4 390 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-209ENST00000492728 TSSK6Q9BXA6 273 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 NTN4Q9HB63 628 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 TBC1D23Q9NUY8 699 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 CTSZQ9UBR2 303 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 MIOXQ9UGB7 285 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 U3KQV3 271 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 MGAM2Q2M2H8 2515 aa15.39■□□□□ 0.05
CHD1L-209ENST00000492728 MDFIC2A0A1B0GVS7 189 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 C22orf46C9J442 243 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 FSTL3O95633 263 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 SPI1P17947 270 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 PITPNBP48739 271 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 GNB2P62879 340 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 MALLQ13021 153 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 LCN8Q6JVE9 175 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 RPL13AP3Q6NVV1 102 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 PARP8Q8N3A8 854 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 C3orf56Q8N813 242 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 SPRYD4Q8WW59 207 aaPredicted RBP15.38■□□□□ 0.05
CHD1L-209ENST00000492728 RAB40AQ8WXH6 277 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 SPTSSAQ969W0 71 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 UPRTQ96BW1 309 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 ADAT1Q9BUB4 502 aaKnown RBP15.38■□□□□ 0.05
CHD1L-209ENST00000492728 NDE1Q9NXR1 346 aa15.38■□□□□ 0.05
CHD1L-209ENST00000492728 TRAV40A0A0B4J280 105 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 LRRC30A6NM36 301 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 B2RBV5 119 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 FCN3O75636 299 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
CHD1L-209ENST00000492728 PLATP00750 562 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 SPARCP09486 303 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 PRTN3P24158 256 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 PRKXP51817 358 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 OR8G1Q15617 311 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 LINC01590Q5TEZ4 76 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 WDR25Q64LD2 544 aaPredicted RBP15.37■□□□□ 0.05
CHD1L-209ENST00000492728 C1orf87Q8N0U7 546 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 OR8B3Q8NGG8 313 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 OR8B2Q96RD0 313 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 NIPSNAP1Q9BPW8 284 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 COPS4Q9BT78 406 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 DGCR6LQ9BY27 220 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 MAGIXQ9H6Y5 334 aa15.37■□□□□ 0.05
CHD1L-209ENST00000492728 HKR1P10072 659 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 PSMB10P40306 273 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 ENTPD1P49961 510 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 SLC25A1P53007 311 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 OR2T5Q6IEZ7 315 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 DRAM2Q6UX65 266 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 DCDC5Q6ZRR9 648 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 C9orf139Q6ZV77 190 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 SPATC1Q76KD6 591 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 LINC00471Q8N535 108 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 IQCF1Q8N6M8 205 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 OR56B2PQ8NGI1 322 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 OR2T29Q8NH02 315 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 SLAMF6Q96DU3 332 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 MED20Q9H944 212 aa15.36■□□□□ 0.05
CHD1L-209ENST00000492728 SAMHD1Q9Y3Z3 626 aaKnown RBP15.36■□□□□ 0.05
CHD1L-209ENST00000492728 KIR2DS1A0A191URI9 304 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 DHRS12A0PJE2 317 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 ZNF593O00488 134 aaPredicted RBP15.35■□□□□ 0.05
CHD1L-209ENST00000492728 PPIAL4GP0DN37 164 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 T-ENOLP0DO92 83 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 CPT2P23786 658 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 BAMBIQ13145 260 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 MICAQ29983 383 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 SFRP4Q6FHJ7 346 aaPredicted RBP15.35■□□□□ 0.05
CHD1L-209ENST00000492728 BTNL3Q6UXE8 466 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 LRRN1Q6UXK5 716 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 ZNF826PQ6ZT77 177 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 ERGIC1Q969X5 290 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 CLPTM1LQ96KA5 538 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 AMELYQ99218 206 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 NUDT16L1Q9BRJ7 211 aaKnown RBP15.35■□□□□ 0.05
CHD1L-209ENST00000492728 PPP1R3EQ9H7J1 279 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 CENPMQ9NSP4 180 aa15.35■□□□□ 0.05
CHD1L-209ENST00000492728 CLN8Q9UBY8 286 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms