RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	KRT77	Q7Z794	578 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR2Z1	Q8NG97	314 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR13G1	Q8NGZ3	307 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	FAM81A	Q8TBF8	368 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	ELMOD3	Q96FG2	381 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	RDH12	Q96NR8	316 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC29A1	Q99808	456 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	VCX	Q9H320	206 aa		11.75	□□□□□ -0.53
PTPN7-215	ENST00000492451	CR1	P17927	2039 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451		A0A096LNT2	108 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	LYNX1	G3V0Z9	82 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF254	O75437	659 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	ANXA2	P07355	339 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	LYNX1	P0DP58	116 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	ANPEP	P15144	967 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	TNFRSF1A	P19438	455 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	CFL1	P23528	166 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	COL8A2	P25067	703 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	SNRPG	P62308	76 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	TNFAIP6	P98066	277 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	ROM1	Q03395	351 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	HFE	Q30201	348 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC25A30	Q5SVS4	291 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	GLYATL3	Q5SZD4	288 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	MEDAG	Q5VYS4	303 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451		Q6ZR03	302 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	USP51	Q70EK9	711 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR5AS1	Q8N127	324 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	MBOAT4	Q96T53	435 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	REPIN1	Q9BWE0	567 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	MRO	Q9BYG7	248 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	BPESC1	Q9GZL8	116 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR10A2	Q9H208	303 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	TMEM100	Q9NV29	134 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	CLN6	Q9NWW5	311 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	IL19	Q9UHD0	177 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	KLHDC2	Q9Y2U9	406 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	NOP16	Q9Y3C1	178 aa	Known RBP	11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	N6AMT1	Q9Y5N5	214 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	GMPPB	Q9Y5P6	360 aa		11.74	□□□□□ -0.53
PTPN7-215	ENST00000492451	GGT3P	A6NGU5	568 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SNTN	A6NMZ2	147 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451		E9PQ18	207 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF670-ZNF695	F2Z2N8	137 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	TBX1	O43435	398 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	MPZL2	O60487	215 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	RP2	O75695	350 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SBK2	P0C263	348 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC2A1	P11166	492 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	DCTD	P32321	178 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ATP6V1E1	P36543	226 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	GPR6	P46095	362 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	CHN2	P52757	468 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	HCCS	P53701	268 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF121	P58317	390 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF92	Q03936	586 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC3A1	Q07837	685 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	TRIP10	Q15642	601 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	TIGD6	Q17RP2	521 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	LRRN1	Q6UXK5	716 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	FAM57B	Q71RH2	274 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC35F2	Q8IXU6	374 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF679	Q8IYX0	411 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	PACRGL	Q8N7B6	248 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	BHLHE23	Q8NDY6	225 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	YIPF5	Q969M3	257 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SPSB4	Q96A44	273 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	PGAM5	Q96HS1	289 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC30A2	Q9BRI3	323 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	SLC22A4	Q9H015	551 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	RGCC	Q9H4X1	137 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ADGRL4	Q9HBW9	690 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	DNAJC27	Q9NZQ0	273 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	4e-10	■■■■□ 24.1
PTPN7-215	ENST00000492451	LRP12	Q9Y561	859 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451	DNHD1	Q96M86	4753 aa		11.73	□□□□□ -0.53
PTPN7-215	ENST00000492451		A0A1B0GWJ7	208 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	ACOD1	A6NK06	481 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	CD300LB	A8K4G0	201 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	CLDN25	C9JDP6	229 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	PPIH	O43447	177 aa	Known RBP	11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	CDC14B	O60729	498 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	TACSTD2	P09758	323 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR2T7	P0C7T2	308 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	DDOST	P39656	456 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	SRP9	P49458	86 aa	Known RBP	11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	PSMA6	P60900	246 aa	Known RBP	11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	OCLN	Q16625	522 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	TMEM249	Q2WGJ8	235 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	PRSS45	Q7RTY3	260 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	ZNF555	Q8NEP9	628 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR51G2	Q8NGK0	314 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR2T27	Q8NH04	317 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR2AE1	Q8NHA4	323 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	TIMD4	Q96H15	378 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	OR8B4	Q96RC9	309 aa		11.72	□□□□□ -0.53
PTPN7-215	ENST00000492451	VCX3B	Q9H321	246 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms