RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 OR5L1Q8NGL2 311 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 OR51A7Q8NH64 312 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 RASD2Q96D21 266 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 GON7Q9BXV9 100 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MSL2Q9HCI7 577 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 PALMDQ9NP74 551 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 OR5V1Q9UGF6 321 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 RPS6KA6Q9UK32 745 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 PPP1R3CQ9UQK1 317 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 TEX13CA0A0J9YWL9 993 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 A0A1W2PPL8 197 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 PRSS37A4D1T9 235 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 OR6C6A6NF89 314 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 TMEM210A6NLX4 147 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 TRAPPC2LH3BP13 241 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 TMEM178BH3BS89 294 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 WIPF1O43516 503 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 RGS9O75916 674 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-212ENST00000492407 RNASE1P07998 156 aaKnown RBP7.68□□□□□ -1.18
HDAC3-212ENST00000492407 WNT2P09544 360 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 HSMCR30P0CW71 290 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 IL13RA1P78552 427 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 GUCY1A3Q02108 690 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 RIPPLY1Q0D2K3 151 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 ZMYND11Q15326 602 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 OCLNQ16625 522 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 ZBED5Q49AG3 693 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 ESCO2Q56NI9 601 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 Q6ZR03 302 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 RRM2BQ7LG56 351 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 CYP4Z1Q86W10 505 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 GLB1L2Q8IW92 636 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 SIGLECL1Q8N7X8 197 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 OR2Z1Q8NG97 314 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 OR13G1Q8NGZ3 307 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 GEMIN6Q8WXD5 167 aaKnown RBP7.68□□□□□ -1.18
HDAC3-212ENST00000492407 ERGIC1Q969X5 290 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 CMBLQ96DG6 245 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 TPD52L3Q96J77 140 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 PLEKHA8Q96JA3 519 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 SIGLEC11Q96RL6 698 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 GPX7Q96SL4 187 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-212ENST00000492407 TMEM120AQ9BXJ8 343 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 SLITRK2Q9H156 845 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 C1orf21Q9H246 121 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 NMNAT1Q9HAN9 279 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-212ENST00000492407 SAR1AQ9NR31 198 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 MMP26Q9NRE1 261 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 VSX1Q9NZR4 365 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-212ENST00000492407 MIOXQ9UGB7 285 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 STARD10Q9Y365 291 aa7.68□□□□□ -1.18
HDAC3-212ENST00000492407 MGAM2Q2M2H8 2515 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 TRAV27A0A087WT01 109 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 A0A087WUU8 490 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 A0A1B0GUS0 222 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 LRRC30A6NM36 301 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 FFAR1O14842 300 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 TMPRSS2O15393 492 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 DOK2O60496 412 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 PTP4A3O75365 173 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 KHDRBS3O75525 346 aaKnown RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 PTBP3O95758 552 aaKnown RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 TXNDC12O95881 172 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 SCG5P05408 212 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 SELEP16581 610 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 RAB4AP20338 218 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 GALP22466 123 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 SDHAP31040 664 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 RPL4P36578 427 aaKnown RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 HTR5AP47898 357 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 SRP9P49458 86 aaKnown RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 PAX2Q02962 417 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 BAMBIQ13145 260 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 IFI44LQ53G44 452 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 KLF17Q5JT82 389 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 SLX4IPQ5VYV7 408 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 BTNL3Q6UXE8 466 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF730Q6ZMV8 503 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 PTCHD4Q6ZW05 846 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 CBLL1Q75N03 491 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 FAM122BQ7Z309 247 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 C1orf87Q8N0U7 546 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 CLDN22Q8N7P3 220 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 CELF2-AS1Q8N7Q2 184 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 OR8G5Q8NG78 346 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 OR52E2Q8NGJ4 325 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 OR1F12Q8NHA8 337 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 RP9Q8TA86 221 aaKnown RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 MYDGFQ969H8 173 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 APOBEC3DQ96AK3 386 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 UPRTQ96BW1 309 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF582Q96NG8 517 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 HOPXQ9BPY8 73 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-212ENST00000492407 PRDM13Q9H4Q3 707 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 GCM1Q9NP62 436 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 NRIP3Q9NQ35 241 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 TAS2R3Q9NYW6 316 aa7.67□□□□□ -1.18
HDAC3-212ENST00000492407 ENOPH1Q9UHY7 261 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms