RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	CARTPT	Q16568	116 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	SMN1	Q16637	294 aa	Known RBP	11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	KLHL22	Q53GT1	634 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	GLYATL3	Q5SZD4	288 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	FBXW12	Q6X9E4	464 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	SSX6	Q7RTT6	188 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	GTF3A	Q92664	365 aa	Known RBP	11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	TFAP2C	Q92754	450 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	MSL2	Q9HCI7	577 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	CYSLTR2	Q9NS75	346 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	EXOG	Q9Y2C4	368 aa	Known RBP	11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	HSPE1-MOB4	S4R3N1	261 aa		11.24	□□□□□ -0.61
AGAP3-223	ENST00000492234	CSMD1	Q96PZ7	3565 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	METTL15	A6NJ78	407 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	C17orf100	A8MU93	164 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	XRCC2	O43543	280 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	FADS2	O95864	444 aa	Known RBP	11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	KITLG	P21583	273 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	VHL	P40337	213 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	ACTC1	P68032	377 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	ACTA1	P68133	377 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	ROM1	Q03395	351 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	CDK5R2	Q13319	367 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	TST	Q16762	297 aa	Known RBP	11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	CLEC12B	Q2HXU8	276 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	TMEM255A	Q5JRV8	349 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	IZUMO2	Q6UXV1	221 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	PLEKHG7	Q6ZR37	379 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	THAP5	Q7Z6K1	395 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	LHFPL3	Q86UP9	236 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	ACBD7	Q8N6N7	88 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	BHLHE23	Q8NDY6	225 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	OR52H1	Q8NGJ2	320 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	NEU4	Q8WWR8	484 aa	Predicted RBP	11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	SGK3	Q96BR1	496 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	MRPL48	Q96GC5	212 aa	Known RBP	11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	REEP6	Q96HR9	211 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	CXXC4	Q9H2H0	198 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	DECR2	Q9NUI1	292 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	MRM2	Q9UI43	246 aa	Known RBP	11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	GNG8	Q9UK08	70 aa		11.23	□□□□□ -0.61
AGAP3-223	ENST00000492234	ANOS1	P23352	680 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	MAGEB1	P43366	347 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	MMP15	P51511	669 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	PSMA6	P60900	246 aa	Known RBP	11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	CCL8	P80075	99 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZNF85	Q03923	595 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	RAB40B	Q12829	278 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	TP53I3	Q53FA7	332 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZMAT1	Q5H9K5	638 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	PRSS57	Q6UWY2	283 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	FAM220A	Q7Z4H9	259 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	COMMD2	Q86X83	199 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	OR2Z1	Q8NG97	314 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	OR52I1	Q8NGK6	324 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234		Q96MF0	132 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	REPIN1	Q9BWE0	567 aa	Known RBP	11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	PBOV1	Q9GZY1	135 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	TMEM100	Q9NV29	134 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZNF319	Q9P2F9	582 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZDHHC8	Q9ULC8	765 aa		11.22	□□□□□ -0.61
AGAP3-223	ENST00000492234	CHD3	Q12873	2000 aa	Known RBP	11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	IRGM	A1A4Y4	181 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	ACOD1	A6NK06	481 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	IQCF6	A8MYZ5	107 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	LOC110117498-PIK3R3	F6TDL0	507 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234		J3QLW9	94 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	SULT1C4	O75897	302 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	IGHV1-46	P01743	117 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	TACSTD2	P09758	323 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	DAO	P14920	347 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZNF19	P17023	458 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	TNFSF4	P23510	183 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	CFL1	P23528	166 aa	Known RBP	11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	DCTD	P32321	178 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	HSPA13	P48723	471 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	TESK1	Q15569	626 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	PCGF3	Q3KNV8	242 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	LIPN	Q5VXI9	398 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	CLEC2A	Q6UVW9	174 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	PRSS45	Q7RTY3	260 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	ZNF525	Q8N782	197 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	WFDC11	Q8NEX6	87 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	BPIFB6	Q8NFQ5	453 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	OR8G5	Q8NG78	346 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	OR8B12	Q8NGG6	310 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	OR13G1	Q8NGZ3	307 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	UBASH3B	Q8TF42	649 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	PPP1R14A	Q96A00	147 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	SIGLEC11	Q96RL6	698 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	MYCBP	Q99417	103 aa	Predicted RBP	11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	RHNO1	Q9BSD3	238 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	OPA3	Q9H6K4	179 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	MRPS18A	Q9NVS2	196 aa	Known RBP	11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	FAM206A	Q9NX38	181 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	MYRF	Q9Y2G1	1151 aa		11.21	□□□□□ -0.61
AGAP3-223	ENST00000492234	SNX5	Q9Y5X3	404 aa		11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms