RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ZNF92Q03936 586 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 FLOT2Q14254 428 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 TAF13Q15543 124 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 PCK2Q16822 640 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 GLYATL3Q5SZD4 288 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 LINC01590Q5TEZ4 76 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 DRAM2Q6UX65 266 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 KCNJ15Q99712 375 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 PDP1Q9P0J1 537 aaPredicted RBP12.6□□□□□ -0.39
TOM1-215ENST00000491987 OPN4Q9UHM6 478 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 N6AMT1Q9Y5N5 214 aa12.6□□□□□ -0.39
TOM1-215ENST00000491987 GGT3PA6NGU5 568 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 LRRC30A6NM36 301 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 CD300LBA8K4G0 201 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 CEACAM18A8MTB9 384 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 ZNF878C9JN71 531 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 E2F6O75461 281 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 CA6P23280 308 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 PMELP40967 661 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 BLVRAP53004 296 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 MAB21L1Q13394 359 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 EIF2B1Q14232 305 aaKnown RBP12.59□□□□□ -0.39
TOM1-215ENST00000491987 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 FAM201AQ5SY85 155 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 PRAMEF6Q5VXH4 476 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 ERI1Q8IV48 349 aaKnown RBP12.59□□□□□ -0.39
TOM1-215ENST00000491987 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 MUC20Q8N307 709 aaPredicted RBP12.59□□□□□ -0.39
TOM1-215ENST00000491987 OR6N2Q8NGY6 317 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
TOM1-215ENST00000491987 TMEM165Q9HC07 324 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 MMP26Q9NRE1 261 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 STAB1Q9NY15 2570 aa12.59□□□□□ -0.39
TOM1-215ENST00000491987 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 IRF2P14316 349 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 RPS2P15880 293 aaKnown RBP12.58□□□□□ -0.4
TOM1-215ENST00000491987 GSTT1P30711 240 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 CD200P41217 278 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 RAD23AP54725 363 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 CBX1P83916 185 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 GINS1Q14691 196 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 OR8G1Q15617 311 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 ZNF181Q2M3W8 571 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 ESCO2Q56NI9 601 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 SEMA6DQ8NFY4 1073 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 ZNF418Q8TF45 676 aaPredicted RBP12.58□□□□□ -0.4
TOM1-215ENST00000491987 INTS14Q96SY0 518 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.4
TOM1-215ENST00000491987 OR51V1Q9H2C8 321 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 POMPQ9Y244 141 aa12.58□□□□□ -0.4
TOM1-215ENST00000491987 PPIAL4EA0A075B759 164 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 A0A0A6YYJ9 748 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 PPIAL4CA0A0B4J2A2 164 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 TCRBV3S1A0A5B6 114 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 A8MXK9 166 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 PPIAL4DF5H284 164 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 FAM20BO75063 409 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 FKBP6O75344 327 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 DNAJC8O75937 253 aaPredicted RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 GLCEO94923 617 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 ANXA2P07355 339 aaKnown RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 WNT2P09544 360 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 PPIAL4FP0DN26 164 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 OSMP13725 252 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 HOXB6P17509 224 aaKnown RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 PAICSP22234 425 aaKnown RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 PRKACGP22612 351 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 HSD11B1P28845 292 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 GATA4P43694 442 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 CX3CR1P49238 355 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 PLBD1Q6P4A8 553 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 CELF2-AS1Q8N7Q2 184 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 DEFB108BQ8NET1 73 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 OR11L1Q8NGX0 322 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 DVL3Q92997 716 aaPredicted RBP12.57□□□□□ -0.4
TOM1-215ENST00000491987 SLC6A7Q99884 636 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 TMEM246Q9BRR3 403 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 ABHD6Q9BV23 337 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 SLC22A4Q9H015 551 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 YY1AP1Q9H869 796 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 ZNF556Q9HAH1 456 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 OR5V1Q9UGF6 321 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 PPIAL4AQ9Y536 164 aa12.57□□□□□ -0.4
TOM1-215ENST00000491987 PRR23D1E9PI22 279 aaPredicted RBP12.56□□□□□ -0.4
TOM1-215ENST00000491987 TBX1O43435 398 aa12.56□□□□□ -0.4
TOM1-215ENST00000491987 XRCC2O43543 280 aa12.56□□□□□ -0.4
TOM1-215ENST00000491987 FSHBP01225 129 aa12.56□□□□□ -0.4
TOM1-215ENST00000491987 PRR23D2P0DMB1 279 aaPredicted RBP12.56□□□□□ -0.4
TOM1-215ENST00000491987 ZNF12P17014 697 aa12.56□□□□□ -0.4
TOM1-215ENST00000491987 SLC15A1P46059 708 aa12.56□□□□□ -0.4
TOM1-215ENST00000491987 HOXA4Q00056 320 aaPredicted RBP12.56□□□□□ -0.4
TOM1-215ENST00000491987 MPPED2Q15777 294 aa12.56□□□□□ -0.4
TOM1-215ENST00000491987 ZNF404Q494X3 552 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms