RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SEZ6L2Q6UXD5 910 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 ATG4DQ86TL0 474 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 TUSC5Q8IXB3 177 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 OR6V1Q8N148 313 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF610Q8N9Z0 462 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 CYB561A3Q8NBI2 242 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 OR2T27Q8NH04 317 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 OR51A7Q8NH64 312 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SLC25A43Q8WUT9 341 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 PCNPQ8WW12 178 aaKnown RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 MRPL48Q96GC5 212 aaKnown RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 GMPPAQ96IJ6 420 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 PIGMQ9H3S5 423 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 NANSQ9NR45 359 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 KLHL9Q9P2J3 617 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 AK6Q9Y3D8 172 aaKnown RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 PKDREJQ9NTG1 2253 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 FREM1Q5H8C1 2179 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 TRAV27A0A087WT01 109 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 TRBV2A0A0J9YWF9 115 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SULT2B1O00204 365 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF208O43345 1280 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 PPP1R3DO95685 299 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 CD1AP06126 327 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 AGTR1P30556 359 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SLC6A6P31641 620 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 VEGFCP49767 419 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 TP53I3Q53FA7 332 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SFRP4Q6FHJ7 346 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 RPL22L1Q6P5R6 122 aaKnown RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF613Q6PF04 617 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SSX6Q7RTT6 188 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 NUFIP2Q7Z417 695 aaKnown RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SYT9Q86SS6 491 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 MCEMP1Q8IX19 187 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SPICQ8N5J4 248 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 POMGNT2Q8NAT1 580 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 LHFPL5Q8TAF8 219 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 SNX33Q8WV41 574 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 ZNF775Q96BV0 537 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 PELI1Q96FA3 418 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 DDOQ99489 341 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 RBM24Q9BX46 236 aaKnown RBP8.28□□□□□ -1.08
BRCA1-219ENST00000491747 HRASLSQ9HDD0 168 aa8.28□□□□□ -1.08
BRCA1-219ENST00000491747 hCG_1807616A0A1W2PRN6 198 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 L7N2F9 121 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 PDCD5O14737 125 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 MSTNO14793 375 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 GPRIN2O60269 458 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 GMDSO60547 372 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 PMS2P2O95744 297 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 PLGP00747 810 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 GYPBP06028 91 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 GIPP09681 153 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CTRB1P17538 263 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 ZP3P21754 424 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CXCR1P25024 350 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 EDNRAP25101 427 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 RAP2BP61225 183 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 MRPS10P82664 201 aaKnown RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 DHODHQ02127 395 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 EGR4Q05215 589 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 FAM27E3Q08E93 113 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 DBPQ10586 325 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 NHLRC3Q5JS37 347 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CTRB2Q6GPI1 263 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 IZUMO1Q8IYV9 350 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CMTM4Q8IZR5 234 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 SMAP2Q8WU79 429 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 FCAMRQ8WWV6 532 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 DDIT4LQ96D03 193 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 OR14A2Q96R54 314 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CNN2Q99439 309 aaKnown RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 MRI1Q9BV20 369 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 OR10A4Q9H209 315 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 TMEM27Q9HBJ8 222 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 GPN1Q9HCN4 374 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 PLSCR4Q9NRQ2 329 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 MGAT4CQ9UBM8 478 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 HDGFL3Q9Y3E1 203 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 ITPR2Q14571 2701 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 A0A1B0GWA3 101 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 AIPO00170 330 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 SULT1B1O43704 296 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CREBL2O60519 120 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 CYTIPO60759 359 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 NPIPB7O75200 414 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 PTP4A3O75365 173 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 KHDRBS3O75525 346 aaKnown RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 KRT33AO76009 404 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 LYPD3O95274 346 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 ALDOBP05062 364 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 ACSM4P0C7M7 580 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 IFNGR1P15260 489 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 ATF4P18848 351 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-219ENST00000491747 SRMP19623 302 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 NTF4P34130 210 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 H3F3AP84243 136 aa8.27□□□□□ -1.09
BRCA1-219ENST00000491747 EEF1A1P5Q5VTE0 462 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms