RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 LRRN1Q6UXK5 716 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 SHFQ7M4L6 423 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 DCXRQ7Z4W1 244 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 FTMTQ8N4E7 242 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 SLC37A3Q8NCC5 494 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 OR8B3Q8NGG8 313 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 GCDHQ92947 438 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 OR8B2Q96RD0 313 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 DDOQ99489 341 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 FEVQ99581 238 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 CADM1Q9BY67 442 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 TMPRSS13Q9BYE2 586 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 WDR76Q9H967 626 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 CMC2Q9NRP2 79 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 DDX28Q9NUL7 540 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 C14orf119Q9NWQ9 140 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 PPIAL4AQ9Y536 164 aa13.96□□□□□ -0.17
PDLIM2-217ENST00000491330 TVP23AA6NH52 213 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF878C9JN71 531 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF593O00488 134 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 FSTL3O95633 263 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 FCGR1AP12314 374 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 GRK5P34947 590 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 ZMYND11Q15326 602 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 TMEM255AQ5JRV8 349 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 RHOUQ7L0Q8 258 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 MOGAT3Q86VF5 341 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 PLPP7Q8NBV4 271 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 NEIL1Q96FI4 390 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 KCNJ15Q99712 375 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 VNN3Q9NY84 501 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 ENOPH1Q9UHY7 261 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 N6AMT1Q9Y5N5 214 aa13.95□□□□□ -0.18
PDLIM2-217ENST00000491330 ANKRD30BLA7E2S9 258 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 F5H5P2 479 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 HMGN1P05114 100 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 HILS1P60008 231 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 CRMP1Q14194 572 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 TEX30Q5JUR7 227 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 C10orf67Q8IYJ2 551 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 OR51L1Q8NGJ5 315 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 OR9Q1Q8NGQ5 310 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 SLAMF6Q96DU3 332 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 DUS3LQ96G46 650 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 PLA2G12AQ9BZM1 189 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 ARMC1Q9NVT9 282 aa13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 MRPL22Q9NWU5 206 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 PDP1Q9P0J1 537 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 POLR3KQ9Y2Y1 108 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-217ENST00000491330 CD300LBA8K4G0 201 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 CEACAM18A8MTB9 384 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 TBX1O43435 398 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 NDUFA2O43678 99 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 SOX14O95416 240 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 OSMP13725 252 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 SPI1P17947 270 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 POU1F1P28069 291 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 GATA4P43694 442 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 PRKXP51817 358 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 SRSF2Q01130 221 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF154Q13106 437 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 EIF2B1Q14232 305 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 PCK2Q16822 640 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 TIGD6Q17RP2 521 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF362Q5T0B9 420 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 CD276Q5ZPR3 534 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 OR52H1Q8NGJ2 320 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 OR8D4Q8NGM9 314 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 OR8S1Q8NH09 359 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 ZNF420Q8TAQ5 688 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 MAP6Q96JE9 813 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 INTS14Q96SY0 518 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 NIPSNAP1Q9BPW8 284 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 OSBPL10Q9BXB5 764 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 PRRG3Q9BZD7 231 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 NMNAT2Q9BZQ4 307 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 MRPL15Q9P015 296 aaKnown RBP13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 RNF7Q9UBF6 113 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 CLN8Q9UBY8 286 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 NUP50Q9UKX7 468 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 COMMD3-BMI1R4GMX3 469 aa13.93□□□□□ -0.18
PDLIM2-217ENST00000491330 A8MXK9 166 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 PRR23D1E9PI22 279 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 H0YL77 283 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 CIB2O75838 187 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 CYB5R3P00387 301 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 HLA-DPB1P04440 258 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 ANXA2P07355 339 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 WNT2P09544 360 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 PRR23D2P0DMB1 279 aaPredicted RBP13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 ADRA2CP18825 462 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 CA6P23280 308 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 GSTT1P30711 240 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 GNALP38405 381 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 CD200P41217 278 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 MTNR1AP48039 350 aa13.92□□□□□ -0.18
PDLIM2-217ENST00000491330 NPY4RP50391 375 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms