RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 LRP12Q9Y561 859 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 POMT1Q9Y6A1 747 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 PRSS38A1L453 326 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 PRAMEF26H0Y7S4 382 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 CSTBP04080 98 aaKnown RBP17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 TBPP20226 339 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 CSNK1EP49674 416 aaKnown RBP17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 SULT1A2P50226 295 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 CBLN3Q6UW01 205 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 OR51F2Q8NH61 342 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 SECTM1Q8WVN6 248 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 TCTEX1D2Q8WW35 142 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 TAAR8Q969N4 342 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 ZNF524Q96C55 264 aa17.26■□□□□ 0.35
SNAPC3-206ENST00000490969 TGFBR3LH3BV60 316 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 NQO2P16083 231 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 PMELP40967 661 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 STARD6P59095 220 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 SLC9A3R2Q15599 337 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 RD3Q7Z3Z2 195 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 NKAIN3Q8N8D7 197 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 TAAR9Q96RI9 348 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 ABHD6Q9BV23 337 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 PAPOLGQ9BWT3 736 aaKnown RBP17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 PARP11Q9NR21 331 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 PRR13Q9NZ81 148 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 VPS13AQ96RL7 3174 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 LOC107986453A0A1B0GWG9 222 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 C11orf98E9PRG8 122 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 WRBO00258 174 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 LMX1BO60663 402 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 APBB3O95704 486 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 GNB3P16520 340 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 ACKR3P25106 362 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 EIF2S3P41091 472 aaKnown RBP17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 ID4P47928 161 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 UNC119Q13432 240 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 EBPQ15125 230 aaKnown RBP17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 KRBOX4Q5JUW0 171 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 FAM219AQ8IW50 185 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 FAM160A2Q8N612 972 aaPredicted RBP17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 DTWD2Q8NBA8 298 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 OR1E3Q8WZA6 343 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 TSACCQ96A04 125 aaPredicted RBP17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 ISOC2Q96AB3 205 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 DNAJA3Q96EY1 480 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 TMEM41AQ96HV5 264 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 RSRP1Q9BUV0 290 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 CNTD2Q9H8S5 307 aa17.25■□□□□ 0.35
SNAPC3-206ENST00000490969 SKP2Q13309 424 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 HMGN3Q15651 99 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 AWAT1Q58HT5 328 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 C16orf52Q8NHV5 167 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 TMEM230Q96A57 120 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 OCSTAMPQ9BR26 566 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 TUBA4BQ9H853 241 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 DNAJB11Q9UBS4 358 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 EMC9Q9Y3B6 208 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 ARID1BQ8NFD5 2236 aaPredicted RBP17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 TDRD6O60522 2096 aaKnown RBP17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 A0A1W2PPH5 198 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 SLC16A7O60669 478 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 SFT2D2O95562 160 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 SNRNP70P08621 437 aaKnown RBP17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 OR8U9P0C7N5 309 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 RAB5AP20339 215 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 GLP1RP43220 463 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 RAB32Q13637 225 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 CLEC18BQ6UXF7 455 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 MARCH3Q86UD3 253 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 OR9A4Q8NGU2 314 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 OR8U1Q8NH10 309 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 OR4K15Q8NH41 348 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 TERB2Q8NHR7 220 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 RLN3Q8WXF3 142 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 C5orf66Q9H5L9 145 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 PRDM6Q9NQX0 595 aa17.24■□□□□ 0.35
SNAPC3-206ENST00000490969 A0A0A6YYC8 382 aaPredicted RBP17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 C7orf77A4D0Y5 90 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 I3L1I5 382 aaPredicted RBP17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 FNDC7Q5VTL7 733 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 Q6ZRG5 221 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 BAHD1Q8TBE0 780 aaPredicted RBP17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 FLVCR1Q9Y5Y0 555 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 hCG_1809904A0A1W2PP81 198 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 A0A1W2PR64 198 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 A0A1W2PRV1 198 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 PRSS37A4D1T9 235 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 TAAR5O14804 337 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 PRKNO60260 465 aaPredicted RBP17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 SRFP11831 508 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 TDGQ13569 410 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 RTN4RL2Q86UN3 420 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 METTL21AQ8WXB1 218 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 OR10C1Q96KK4 312 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 TWSG1Q9GZX9 223 aa17.23■□□□□ 0.35
SNAPC3-206ENST00000490969 FBRSQ9HAH7 460 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms