RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZNF511Q8NB15 262 aa8.78□□□□□ -1
TTC28-207ENST00000490475 PROKR2Q8NFJ6 384 aa8.78□□□□□ -1
TTC28-207ENST00000490475 SLC26A10Q8NG04 563 aa8.78□□□□□ -1
TTC28-207ENST00000490475 OR5L1Q8NGL2 311 aa8.78□□□□□ -1
TTC28-207ENST00000490475 SGMS2Q8NHU3 365 aa8.78□□□□□ -1
TTC28-207ENST00000490475 SLC7A6Q92536 515 aa8.78□□□□□ -1
TTC28-207ENST00000490475 OTULINQ96BN8 352 aa8.78□□□□□ -1
TTC28-207ENST00000490475 CENPNQ96H22 339 aaPredicted RBP8.78□□□□□ -1
TTC28-207ENST00000490475 PKP2Q99959 881 aa8.78□□□□□ -1
TTC28-207ENST00000490475 NMNAT2Q9BZQ4 307 aa8.78□□□□□ -1
TTC28-207ENST00000490475 OR2J1Q9GZK6 312 aa8.78□□□□□ -1
TTC28-207ENST00000490475 RBM38Q9H0Z9 239 aaKnown RBP8.78□□□□□ -1
TTC28-207ENST00000490475 ZMAT3Q9HA38 289 aaKnown RBP8.78□□□□□ -1
TTC28-207ENST00000490475 CMC2Q9NRP2 79 aa8.78□□□□□ -1
TTC28-207ENST00000490475 MRPL22Q9NWU5 206 aaKnown RBP8.78□□□□□ -1
TTC28-207ENST00000490475 KIF17Q9P2E2 1029 aa8.78□□□□□ -1
TTC28-207ENST00000490475 KLHL21Q9UJP4 597 aa8.78□□□□□ -1
TTC28-207ENST00000490475 LHFPL6Q9Y693 200 aa8.78□□□□□ -1
TTC28-207ENST00000490475 SAC3D1A6NKF1 404 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 TRIM64CA6NLI5 447 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 RIIAD1A6NNX1 92 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 SGCEO43556 437 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 IFNGP01579 166 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 SPI1P17947 270 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 ADRA2CP18825 462 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 EPHA2P29317 976 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 GRK5P34947 590 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 GGT2P36268 569 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 RPS27P42677 84 aaKnown RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 CRISP1P54107 249 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 HIST1H3AP68431 136 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 TNFAIP6P98066 277 aaPredicted RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 CDK5R2Q13319 367 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 AQP6Q13520 282 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 PTGES3Q15185 160 aaKnown RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 TMEM155Q4W5P6 130 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 SPATA46Q5T0L3 261 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 HIST2H3PS2Q5TEC6 136 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 KDM4DQ6B0I6 523 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 HIST2H3AQ71DI3 136 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 VASH1Q7L8A9 365 aaPredicted RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 ZDHHC13Q8IUH4 622 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 ERI1Q8IV48 349 aaKnown RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 LINC00346Q8IVM7 164 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 MUC20Q8N307 709 aaPredicted RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 C3orf56Q8N813 242 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 OR2T4Q8NH00 348 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 FAM81AQ8TBF8 368 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 EME1Q96AY2 570 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 DCLRE1CQ96SD1 692 aaKnown RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 CDADC1Q9BWV3 514 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 TMPRSS13Q9BYE2 586 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 ANKRD60Q9BZ19 345 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 C7orf69Q9H7B7 122 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 WDR76Q9H967 626 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 KRT84Q9NSB2 600 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 PLEK2Q9NYT0 353 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 IL19Q9UHD0 177 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 OAZ3Q9UMX2 235 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 POLR1DQ9Y2S0 133 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 POLR3KQ9Y2Y1 108 aaPredicted RBP8.77□□□□□ -1.01
TTC28-207ENST00000490475 NPTNQ9Y639 398 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 DYSFO75923 2080 aa8.77□□□□□ -1.01
TTC28-207ENST00000490475 LOC105371242A0A075B767 164 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 TMEM89A2RUT3 159 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 OR6C6A6NF89 314 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 DOK2O60496 412 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 HMGN1P05114 100 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 DBHP09172 617 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 PSKH1P11801 424 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 ZNF823P16415 610 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 KITLGP21583 273 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 CFPP27918 469 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 FMO3P31513 532 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 MPV17P39210 176 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 HTR5AP47898 357 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 ALDH3B2P48448 385 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 SLC25A1P53007 311 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 LRRC36Q1X8D7 754 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 RSPO1Q2MKA7 263 aaPredicted RBP8.76□□□□□ -1.01
TTC28-207ENST00000490475 SLC18B1Q6NT16 456 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 PLBD1Q6P4A8 553 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 RFPL4BQ6ZWI9 263 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 CPOQ8IVL8 374 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 GJC3Q8NFK1 279 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 OR1F12Q8NHA8 337 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 MRI1Q9BV20 369 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 OR51V1Q9H2C8 321 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 DDX28Q9NUL7 540 aaKnown RBP8.76□□□□□ -1.01
TTC28-207ENST00000490475 TMEM106BQ9NUM4 274 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 TVP23BQ9NYZ1 205 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 UBAP1Q9NZ09 502 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 CYB5R1Q9UHQ9 305 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 MYRFQ9Y2G1 1151 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 DOCK11Q5JSL3 2073 aa8.76□□□□□ -1.01
TTC28-207ENST00000490475 ZSCAN5BA6NJL1 495 aa8.75□□□□□ -1.01
TTC28-207ENST00000490475 PRR23D1E9PI22 279 aaPredicted RBP8.75□□□□□ -1.01
TTC28-207ENST00000490475 ZNF593O00488 134 aaPredicted RBP8.75□□□□□ -1.01
TTC28-207ENST00000490475 PRR23D2P0DMB1 279 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms