RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 C8orf82Q6P1X6 216 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-216ENST00000489927 ZNF620Q6ZNG0 422 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 BOLLQ8N9W6 283 aaKnown RBP13.15□□□□□ -0.3
PLOD3-216ENST00000489927 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 RP9Q8TA86 221 aaKnown RBP13.15□□□□□ -0.3
PLOD3-216ENST00000489927 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 GATAD2BQ8WXI9 593 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 WDFY2Q96P53 400 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
PLOD3-216ENST00000489927 FN3KRPQ9HA64 309 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 RPRD1BQ9NQG5 326 aaKnown RBP13.15□□□□□ -0.3
PLOD3-216ENST00000489927 ACOXLQ9NUZ1 547 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 CYB5R1Q9UHQ9 305 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 FAM32AQ9Y421 112 aaKnown RBP13.15□□□□□ -0.3
PLOD3-216ENST00000489927 DOCK11Q5JSL3 2073 aa13.15□□□□□ -0.3
PLOD3-216ENST00000489927 LGALS8O00214 317 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 PTBP3O95758 552 aaKnown RBP13.14□□□□□ -0.31
PLOD3-216ENST00000489927 RENP00797 406 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 COX4I1P13073 169 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 HIST1H1CP16403 213 aaKnown RBP13.14□□□□□ -0.31
PLOD3-216ENST00000489927 PDCD1Q15116 288 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 OR8B8Q15620 311 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 RFX4Q33E94 735 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 MRPL21Q7Z2W9 205 aaKnown RBP13.14□□□□□ -0.31
PLOD3-216ENST00000489927 ZBTB46Q86UZ6 589 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 OR2AJ1Q8NGZ0 328 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 OR4K13Q8NH42 304 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 FANK1Q8TC84 345 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 DYRK2Q92630 601 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 C7orf34Q96L11 122 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 KCTD14Q9BQ13 255 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-216ENST00000489927 FUZQ9BT04 418 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 ADAT1Q9BUB4 502 aaKnown RBP13.14□□□□□ -0.31
PLOD3-216ENST00000489927 RASSF4Q9H2L5 321 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 FN3KQ9H479 309 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
PLOD3-216ENST00000489927 RNF114Q9Y508 228 aa13.14□□□□□ -0.31
PLOD3-216ENST00000489927 IGHV1-69DA0A0B4J2H0 117 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 CD300LBA8K4G0 201 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 TIMM23O14925 209 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 ADAM20O43506 726 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 IGHV1-69P01742 117 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 IGHV4-59P01825 116 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 ANOS1P23352 680 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 TPTEP56180 551 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 RPL15P61313 204 aaKnown RBP13.13□□□□□ -0.31
PLOD3-216ENST00000489927 SNAI3Q3KNW1 292 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 SLC36A3Q495N2 470 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 METTL11BQ5VVY1 283 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 ASPHD2Q6ICH7 369 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 FAM86B1Q8N7N1 296 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 PNLDC1Q8NA58 520 aaKnown RBP13.13□□□□□ -0.31
PLOD3-216ENST00000489927 LINC01006Q8NI28 216 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 TBC1D15Q8TC07 691 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 LHX4Q969G2 390 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 MAP6Q96JE9 813 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 DHRS1Q96LJ7 313 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 RBM4BQ9BQ04 359 aaKnown RBP13.13□□□□□ -0.31
PLOD3-216ENST00000489927 TRIM15Q9C019 465 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 SLC22A4Q9H015 551 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 SIRPDQ9H106 197 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 OR52D1Q9H346 318 aa13.13□□□□□ -0.31
PLOD3-216ENST00000489927 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
PLOD3-216ENST00000489927 TRAV38-1A0A0B4J264 116 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 A0A0U1RQK1 487 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 OR6C68A6NDL8 312 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 OOEPA6NGQ2 149 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 M0R135 149 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 ARPC3O15145 178 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 GPR137BO60478 399 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 GMDSO60547 372 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 FCN3O75636 299 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 SLC6A6P31641 620 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 ARF6P62330 175 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 ZNF92Q03936 586 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 SDR9C7Q8NEX9 313 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 OR2AE1Q8NHA4 323 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 ZNF799Q96GE5 643 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 IFT27Q9BW83 186 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
PLOD3-216ENST00000489927 C1orf123Q9NWV4 160 aa13.12□□□□□ -0.31
PLOD3-216ENST00000489927 C5orf63A6NC05 138 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 NDUFA2O43678 99 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 SASH3O75995 380 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 CLPXO76031 633 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 GYPAP02724 150 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 NOS3P29474 1203 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 RPS27P42677 84 aaKnown RBP13.11□□□□□ -0.31
PLOD3-216ENST00000489927 IER3P46695 156 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 KRT72Q14CN4 511 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 ZNF826PQ6ZT77 177 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 BTN2A1Q7KYR7 527 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 FAM90A1Q86YD7 464 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 PDZD9Q8IXQ8 264 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 UBE2FQ969M7 185 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 SPTSSAQ969W0 71 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 PKP2Q99959 881 aa13.11□□□□□ -0.31
PLOD3-216ENST00000489927 EFCAB1Q9HAE3 211 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms