RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TNK1Q13470 666 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 LRRC36Q1X8D7 754 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF829Q3KNS6 432 aaPredicted RBP9.44□□□□□ -0.9
CPSF7-212ENST00000489728 SNAI3Q3KNW1 292 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF322Q6U7Q0 402 aaPredicted RBP9.44□□□□□ -0.9
CPSF7-212ENST00000489728 LRRN1Q6UXK5 716 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 KLBQ86Z14 1044 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 ENTHD1Q8IYW4 607 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 GALNT4Q8N4A0 578 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 OR51G2Q8NGK0 314 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 UBASH3BQ8TF42 649 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 RDH5Q92781 318 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 C18orf12Q96KH6 178 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 EGLN1Q9GZT9 426 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 OR10A2Q9H208 303 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 VCX3BQ9H321 246 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 TPK1Q9H3S4 243 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 CHODLQ9H9P2 273 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 DECR2Q9NUI1 292 aa9.44□□□□□ -0.9
CPSF7-212ENST00000489728 FLNAP21333 2647 aaKnown RBP9.44□□□□□ -0.9
CPSF7-212ENST00000489728 A0A0U1RQV5 110 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 VWC2LB2RUY7 222 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 IFNL4K9M1U5 179 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 SULT1C4O75897 302 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 IGHV1-46P01743 117 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 ANXA2P07355 339 aaKnown RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 ATP6V1E1P36543 226 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 CRYBB2P43320 205 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 CXCR4P61073 352 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 ADARB1P78563 741 aaKnown RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 RIPK1Q13546 671 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 HLXQ14774 488 aaPredicted RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 TIGD6Q17RP2 521 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF691Q5VV52 312 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 SPATC1Q76KD6 591 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 BIVMQ86UB2 503 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 ZCCHC24Q8N2G6 241 aaKnown RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 FTMTQ8N4E7 242 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 DHRSXQ8N5I4 330 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 CELF2-AS1Q8N7Q2 184 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 OR13G1Q8NGZ3 307 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 UBE2FQ969M7 185 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 ELMOD3Q96FG2 381 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 MRPL48Q96GC5 212 aaKnown RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 SLC30A2Q9BRI3 323 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 REG4Q9BYZ8 158 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 SAP30LQ9HAJ7 183 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 MRPS18AQ9NVS2 196 aaKnown RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 MRPL15Q9P015 296 aaKnown RBP9.43□□□□□ -0.9
CPSF7-212ENST00000489728 IL19Q9UHD0 177 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 IKZF2Q9UKS7 526 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 COPS3Q9UNS2 423 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 F8P00451 2351 aa9.43□□□□□ -0.9
CPSF7-212ENST00000489728 IGHV4-30-2A0A087WSY4 118 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 IGHV1-69-2A0A0G2JMI3 117 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 IRGMA1A4Y4 181 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 CD300LBA8K4G0 201 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 H7C1Q1 480 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 J3QRE1 110 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 NCR1O76036 304 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 HPXP02790 462 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 KRT8P05787 483 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 DBTP11182 482 aaKnown RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ATP6V1B1P15313 513 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 TNFRSF1AP19438 455 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 CAPGP40121 348 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 NR4A2P43354 598 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 MAGEB1P43366 347 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 TMEM33P57088 247 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ACTA2P62736 377 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ACTG2P63267 376 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 CCL8P80075 99 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 TNFAIP6P98066 277 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF92Q03936 586 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF91Q05481 1191 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 SLC3A1Q07837 685 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 RAB40BQ12829 278 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 RIN1Q13671 783 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ALKBH6Q3KRA9 238 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ZNF684Q5T5D7 378 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 OR2T2Q6IF00 324 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 Q6ZR03 302 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 PLEKHG7Q6ZR37 379 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 USP51Q70EK9 711 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 FAM57BQ71RH2 274 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 KCTD20Q7Z5Y7 419 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 SPERTQ8NA61 448 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 SPRYD4Q8WW59 207 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-212ENST00000489728 CYGBQ8WWM9 190 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 RNFT2Q96EX2 444 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 REEP6Q96HR9 211 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 PGAM5Q96HS1 289 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ADI1Q9BV57 179 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 ABCB9Q9NP78 766 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 INPP5EQ9NRR6 644 aa9.42□□□□□ -0.9
CPSF7-212ENST00000489728 TMEM100Q9NV29 134 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms