RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PRAMEF6Q5VXH4 476 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 SFRP4Q6FHJ7 346 aaPredicted RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 SLC18B1Q6NT16 456 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 ZNF841Q6ZN19 808 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 ZNF620Q6ZNG0 422 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 CFAP77Q6ZQR2 320 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 LINC00346Q8IVM7 164 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 BOLLQ8N9W6 283 aaKnown RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 PNLDC1Q8NA58 520 aaKnown RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 SCCPDHQ8NBX0 429 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 C19orf18Q8NEA5 215 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 SLC26A10Q8NG04 563 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 DYRK2Q92630 601 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 UBE2FQ969M7 185 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 SLCO4A1Q96BD0 722 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 WDFY2Q96P53 400 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 NMNAT3Q96T66 252 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 CITED1Q99966 193 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 HOPXQ9BPY8 73 aaPredicted RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 KCTD14Q9BQ13 255 aaPredicted RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 ADAT1Q9BUB4 502 aaKnown RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 TRIM15Q9C019 465 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 MMP27Q9H306 513 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 SRA1Q9HD15 236 aaKnown RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 ACOXLQ9NUZ1 547 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 C1RLQ9NZP8 487 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 PDP1Q9P0J1 537 aaPredicted RBP7.78□□□□□ -1.16
SNX17-207ENST00000489402 ARMCX1Q9P291 453 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 B9D1Q9UPM9 204 aa7.78□□□□□ -1.16
SNX17-207ENST00000489402 TRAV38-1A0A0B4J264 116 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 TRBV4-1A0A0J9YWV2 114 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 GGT3PA6NGU5 568 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 C3orf80F5H4A9 247 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 M0R135 149 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 NDUFA2O43678 99 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 GMDSO60547 372 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 GMNNO75496 209 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 COX4I1P13073 169 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 NCK1P16333 377 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 CA6P23280 308 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 SMIM11AP58511 58 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 FXYD6P3P58550 94 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 RELBQ01201 579 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 MZT1Q08AG7 82 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 MPPED2Q15777 294 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 RSPO1Q2MKA7 263 aaPredicted RBP7.77□□□□□ -1.17
SNX17-207ENST00000489402 KRTAP27-1Q3LI81 207 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 OR6V1Q8N148 313 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 OR4K13Q8NH42 304 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 OR52J3Q8NH60 311 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 SPTSSAQ969W0 71 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 ZNF799Q96GE5 643 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 TBX15Q96SF7 602 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 IFT27Q9BW83 186 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 NSRP1Q9H0G5 558 aaKnown RBP7.77□□□□□ -1.17
SNX17-207ENST00000489402 OR52D1Q9H346 318 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 EFCAB1Q9HAE3 211 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 RPRD1BQ9NQG5 326 aaKnown RBP7.77□□□□□ -1.17
SNX17-207ENST00000489402 NDUFAF4Q9P032 175 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 CTSZQ9UBR2 303 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 KCNG2Q9UJ96 466 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 SAMD4AQ9UPU9 718 aaKnown RBP7.77□□□□□ -1.17
SNX17-207ENST00000489402 RNF114Q9Y508 228 aa7.77□□□□□ -1.17
SNX17-207ENST00000489402 IGHV1-69DA0A0B4J2H0 117 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.76□□□□□ -1.17
SNX17-207ENST00000489402 CENPVL3A0A0U1RRI6 287 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 hCG_1807616A0A1W2PRN6 198 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 C5orf63A6NC05 138 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 OOEPA6NGQ2 149 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 A6NLC8 198 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 CD300LBA8K4G0 201 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 ARPC3O15145 178 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 SASH3O75995 380 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 IGHV1-69P01742 117 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 MMP9P14780 707 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 HIST1H1CP16403 213 aaKnown RBP7.76□□□□□ -1.17
SNX17-207ENST00000489402 ZNF823P16415 610 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 NUDT2P50583 147 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 KRTAP10-3P60369 221 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 SEC23BQ15437 767 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 RFX4Q33E94 735 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 C11orf91Q3C1V1 193 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 NAA40Q86UY6 237 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 ZBTB46Q86UZ6 589 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 SPERTQ8NA61 448 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 OR4C15Q8NGM1 316 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 LRTOMTQ8WZ04 291 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 LHX4Q969G2 390 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 DPAGT1Q9H3H5 408 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 SMURF1Q9HCE7 757 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 PNRC2Q9NPJ4 139 aaKnown RBP7.76□□□□□ -1.17
SNX17-207ENST00000489402 C14orf119Q9NWQ9 140 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 C1orf123Q9NWV4 160 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 CYB5R1Q9UHQ9 305 aa7.76□□□□□ -1.17
SNX17-207ENST00000489402 BTBD17A6NE02 478 aa7.75□□□□□ -1.17
SNX17-207ENST00000489402 BHLHE40O14503 412 aa7.75□□□□□ -1.17
SNX17-207ENST00000489402 IDH3BO43837 385 aa7.75□□□□□ -1.17
SNX17-207ENST00000489402 OR10H3O60404 316 aa7.75□□□□□ -1.17
SNX17-207ENST00000489402 GPR137BO60478 399 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms