RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PMELP40967 661 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 CDK5Q00535 292 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 EIF2B1Q14232 305 aaKnown RBP21.01■□□□□ 0.95
HMGN1-217ENST00000489072 TAF13Q15543 124 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 DPY19L4Q7Z388 723 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 MOGAT3Q86VF5 341 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 ERI1Q8IV48 349 aaKnown RBP21.01■□□□□ 0.95
HMGN1-217ENST00000489072 OR6N2Q8NGY6 317 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 INTS14Q96SY0 518 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 REPIN1Q9BWE0 567 aaKnown RBP21.01■□□□□ 0.95
HMGN1-217ENST00000489072 OR51V1Q9H2C8 321 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 ZNF556Q9HAH1 456 aa21.01■□□□□ 0.95
HMGN1-217ENST00000489072 PATZ1Q9HBE1 687 aaKnown RBP21.01■□□□□ 0.95
HMGN1-217ENST00000489072 LOC105371242A0A075B767 164 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 A0A0G2JMP0 313 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 A0A0X1KG70 313 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 CD300LBA8K4G0 201 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 IFNL4K9M1U5 179 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 CYB5R3P00387 301 aaPredicted RBP21■□□□□ 0.95
HMGN1-217ENST00000489072 ANXA8P13928 327 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 SEC61A1P61619 476 aaKnown RBP21■□□□□ 0.95
HMGN1-217ENST00000489072 MAB21L1Q13394 359 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 PLBD1Q6P4A8 553 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 TIGD4Q8IY51 512 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 SPICQ8N5J4 248 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 OR4M2Q8NGB6 313 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 SPRYD4Q8WW59 207 aaPredicted RBP21■□□□□ 0.95
HMGN1-217ENST00000489072 AMELYQ99218 206 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 ABHD6Q9BV23 337 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 METRNQ9UJH8 293 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 PCDHB10Q9UN67 800 aa21■□□□□ 0.95
HMGN1-217ENST00000489072 F5H0A9 414 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-217ENST00000489072 TIPRLO75663 272 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 ZNF205O95201 554 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 PAICSP22234 425 aaKnown RBP20.99■□□□□ 0.95
HMGN1-217ENST00000489072 MDH2P40926 338 aaKnown RBP20.99■□□□□ 0.95
HMGN1-217ENST00000489072 DCAF12L2Q5VW00 463 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 TMEM236Q5W0B7 351 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 SHQ1Q6PI26 577 aaKnown RBP20.99■□□□□ 0.95
HMGN1-217ENST00000489072 KLHL36Q8N4N3 616 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 RFLNBQ8N5W9 214 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 UTP4Q969X6 686 aaKnown RBP20.99■□□□□ 0.95
HMGN1-217ENST00000489072 ZMYND19Q96E35 227 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-217ENST00000489072 N6AMT1Q9Y5N5 214 aa20.99■□□□□ 0.95
HMGN1-217ENST00000489072 DOCK11Q5JSL3 2073 aa20.98■□□□□ 0.95
HMGN1-217ENST00000489072 PRR23D1E9PI22 279 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-217ENST00000489072 PRR23D2P0DMB1 279 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-217ENST00000489072 CA6P23280 308 aa20.98■□□□□ 0.95
HMGN1-217ENST00000489072 GATA4P43694 442 aa20.98■□□□□ 0.95
HMGN1-217ENST00000489072 RNF133Q8WVZ7 376 aa20.98■□□□□ 0.95
HMGN1-217ENST00000489072 SLC25A19Q9HC21 320 aa20.98■□□□□ 0.95
HMGN1-217ENST00000489072 GGT3PA6NGU5 568 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 J3QLI3 93 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 HMGN1P05114 100 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 CD200P41217 278 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 CX3CR1P49238 355 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 RAD23AP54725 363 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 GRB2P62993 217 aaKnown RBP20.97■□□□□ 0.95
HMGN1-217ENST00000489072 ZNF181Q2M3W8 571 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 FAM201AQ5SY85 155 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 PRAMEF6Q5VXH4 476 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 CPOQ8IVL8 374 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 CELF2-AS1Q8N7Q2 184 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 BBS1Q8NFJ9 593 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 NRBF2Q96F24 287 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 TMEM165Q9HC07 324 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 OPN4Q9UHM6 478 aa20.97■□□□□ 0.95
HMGN1-217ENST00000489072 CEACAM18A8MTB9 384 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 TCF21O43680 179 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 SELENOFO60613 162 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 FOXH1O75593 365 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 ADRA2CP18825 462 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 SLC15A1P46059 708 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 OR8G1Q15617 311 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 FAHD1Q6P587 224 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 SHFQ7M4L6 423 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 PRSS45Q7RTY3 260 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 MUC20Q8N307 709 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-217ENST00000489072 DVL3Q92997 716 aaPredicted RBP20.96■□□□□ 0.95
HMGN1-217ENST00000489072 SPSB4Q96A44 273 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 TOR3AQ9H497 397 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 MMP26Q9NRE1 261 aa20.96■□□□□ 0.95
HMGN1-217ENST00000489072 GATA3P23771 443 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 OPRL1P41146 370 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 DAPP51397 102 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 MPPED2Q15777 294 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 KLHL12Q53G59 568 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 C1QL2Q7Z5L3 287 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 OR56B2PQ8NGI1 322 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 ADAT1Q9BUB4 502 aaKnown RBP20.95■□□□□ 0.94
HMGN1-217ENST00000489072 C19orf24Q9BVV8 132 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 SLC22A4Q9H015 551 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 C7orf69Q9H7B7 122 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 PAPOLBQ9NRJ5 636 aaKnown RBP20.95■□□□□ 0.94
HMGN1-217ENST00000489072 DNAJC27Q9NZQ0 273 aa20.95■□□□□ 0.94
HMGN1-217ENST00000489072 POLR3KQ9Y2Y1 108 aaPredicted RBP20.95■□□□□ 0.94
HMGN1-217ENST00000489072 PPIAL4EA0A075B759 164 aa20.94■□□□□ 0.94
HMGN1-217ENST00000489072 PPIAL4CA0A0B4J2A2 164 aa20.94■□□□□ 0.94
HMGN1-217ENST00000489072 LRRC30A6NM36 301 aa20.94■□□□□ 0.94
HMGN1-217ENST00000489072 A8MXK9 166 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms