RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 NXF5Q9H1B4 397 aaKnown RBP2.52□□□□□ -2.01
CALD1-221ENST00000489019 PIGMQ9H3S5 423 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 LRRN3Q9H3W5 708 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 ADGRL4Q9HBW9 690 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 RPRD1BQ9NQG5 326 aaKnown RBP2.52□□□□□ -2.01
CALD1-221ENST00000489019 EXOSC3Q9NQT5 275 aaKnown RBP2.52□□□□□ -2.01
CALD1-221ENST00000489019 FGF21Q9NSA1 209 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 DDX28Q9NUL7 540 aaKnown RBP2.52□□□□□ -2.01
CALD1-221ENST00000489019 HPF1Q9NWY4 346 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 QPCTLQ9NXS2 382 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 C1RLQ9NZP8 487 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 EXTL2Q9UBQ6 330 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 TINAGQ9UJW2 476 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 IKZF2Q9UKS7 526 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 RARRES3Q9UL19 164 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 ZNF346Q9UL40 294 aaKnown RBP2.52□□□□□ -2.01
CALD1-221ENST00000489019 CLEC4AQ9UMR7 237 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 TRAPPC4Q9Y296 219 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 GRIP1Q9Y3R0 1128 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 PCDHGA5Q9Y5G8 931 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 CCDC88CQ9P219 2028 aa2.52□□□□□ -2.01
CALD1-221ENST00000489019 SCN2AQ99250 2005 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 MN1Q10571 1320 aaPredicted RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 TRAV36DV7A0A075B6V5 113 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 IGKV3D-11A0A0A0MRZ8 115 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TMED7-TICAM2A0A0A6YYA0 188 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 IGHV3-20A0A0C4DH32 117 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TRBV2A0A0J9YWF9 115 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TRBV11-1A0A0K0K1C0 115 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 A0A1B0GTQ1 180 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 A0A1W2PPK0 400 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 A0A1W2PQD3 144 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TMEM72A0PK05 275 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TVP23AA6NH52 213 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ANXA2P2A6NMY6 339 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 CENPXA8MT69 81 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ZNF879B4DU55 563 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 NPIPB9F8W1W9 429 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 H7C1C5 153 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 J3QRE1 110 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 VCYO14598 125 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 IMPA2O14732 288 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 PHYHO14832 338 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TFECO14948 347 aaPredicted RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 ARPC3O15145 178 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TO15178 435 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TOX3O15405 576 aaPredicted RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 MAGEB4O15481 346 aaPredicted RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 YKT6O15498 198 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ARHGEF9O43307 516 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 PLPP2O43688 288 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 SELENOFO60613 162 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TSPAN2O60636 221 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ALOX12BO75342 701 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 CCNKO75909 580 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ARL6IP5O75915 188 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 RPP14O95059 124 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 AHSA1O95433 338 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 CD14P08571 375 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 CYC1P08574 325 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 VPREB1P12018 145 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 IL7P13232 177 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 SPNP16150 400 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 SPI1P17947 270 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 SLC2A5P22732 501 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 TCEA1P23193 301 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 PTBP1P26599 531 aaKnown RBP eCLIP2.51□□□□□ -2.014e-9■□□□□ 9.8
CALD1-221ENST00000489019 SHC1P29353 583 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 EVI2BP34910 448 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 GDI2P50395 445 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 DUSP3P51452 185 aaPredicted RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 P2RX1P51575 399 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 POLR2HP52434 150 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 LIMK1P53667 647 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 EMP2P54851 167 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 FBXW4P57775 412 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 LCN6P62502 163 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 SIRPAP78324 504 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 DCDP81605 110 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 PITPNAQ00169 270 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ZNF117Q03924 483 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 HSF2Q03933 536 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 RPL18Q07020 188 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 SKP2Q13309 424 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 GGTLC2Q14390 218 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 INSL4Q14641 139 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 EBPQ15125 230 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 QPRTQ15274 297 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 CD226Q15762 336 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ZNF74Q16587 644 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 C2orf68Q2NKX9 166 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 ACSM3Q53FZ2 586 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 GFI1BQ5VTD9 330 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 HBMQ6B0K9 141 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 RHBDD2Q6NTF9 364 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 WDR73Q6P4I2 378 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 GUSBP11Q6P575 273 aa2.51□□□□□ -2.01
CALD1-221ENST00000489019 RPL22L1Q6P5R6 122 aaKnown RBP2.51□□□□□ -2.01
CALD1-221ENST00000489019 CNIH2Q6PI25 160 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms