RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SPRYD4Q8WW59 207 aaPredicted RBP14.94□□□□□ -0.02
ITGB1-215ENST00000488494 KIF17Q9P2E2 1029 aa14.94□□□□□ -0.02
ITGB1-215ENST00000488494 DYSFO75923 2080 aa14.94□□□□□ -0.02
ITGB1-215ENST00000488494 LOC105371242A0A075B767 164 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 GSC2O15499 205 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 TIPRLO75663 272 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 CYB5R3P00387 301 aaPredicted RBP14.93□□□□□ -0.02
ITGB1-215ENST00000488494 OSMP13725 252 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 MDH2P40926 338 aaKnown RBP14.93□□□□□ -0.02
ITGB1-215ENST00000488494 CX3CR1P49238 355 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 ZNF92Q03936 586 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 TMEM155Q4W5P6 130 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 PLBD1Q6P4A8 553 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 DPY19L4Q7Z388 723 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 KCNJ15Q99712 375 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 ADAT1Q9BUB4 502 aaKnown RBP14.93□□□□□ -0.02
ITGB1-215ENST00000488494 OR51V1Q9H2C8 321 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 N6AMT1Q9Y5N5 214 aa14.93□□□□□ -0.02
ITGB1-215ENST00000488494 CD300LBA8K4G0 201 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 PRR23D1E9PI22 279 aaPredicted RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 IFNL4K9M1U5 179 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 GLCEO94923 617 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 PRR23D2P0DMB1 279 aaPredicted RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 ANXA8P13928 327 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 SEC61A1P61619 476 aaKnown RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 GRB2P62993 217 aaKnown RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 C1orf229Q6ZS94 237 aaPredicted RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 LRRC28Q86X40 367 aaPredicted RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 MUC20Q8N307 709 aaPredicted RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 RFLNBQ8N5W9 214 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 ZMYND19Q96E35 227 aaPredicted RBP14.92□□□□□ -0.02
ITGB1-215ENST00000488494 ABHD6Q9BV23 337 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 TMPRSS13Q9BYE2 586 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 MARCH7Q9H992 704 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 NTN4Q9HB63 628 aa14.92□□□□□ -0.02
ITGB1-215ENST00000488494 GGT3PA6NGU5 568 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 LRRC30A6NM36 301 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 J3QLI3 93 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 TBX1O43435 398 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 TCF21O43680 179 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 ZNF205O95201 554 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 AVPP01185 164 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 ANXA2P07355 339 aaKnown RBP14.91□□□□□ -0.02
ITGB1-215ENST00000488494 CA6P23280 308 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 ZFP36P26651 326 aaKnown RBP14.91□□□□□ -0.02
ITGB1-215ENST00000488494 HSD11B1P28845 292 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 RAD23AP54725 363 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 CDK5Q00535 292 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 OR8G1Q15617 311 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 KLHL12Q53G59 568 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 PRAMEF6Q5VXH4 476 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 TIGD4Q8IY51 512 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 OR56B2PQ8NGI1 322 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 RNF133Q8WVZ7 376 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 DVL3Q92997 716 aaPredicted RBP14.91□□□□□ -0.02
ITGB1-215ENST00000488494 PLEKHA8Q96JA3 519 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 AMELYQ99218 206 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 REPIN1Q9BWE0 567 aaKnown RBP14.91□□□□□ -0.02
ITGB1-215ENST00000488494 PATZ1Q9HBE1 687 aaKnown RBP14.91□□□□□ -0.02
ITGB1-215ENST00000488494 PAPOLBQ9NRJ5 636 aaKnown RBP14.91□□□□□ -0.02
ITGB1-215ENST00000488494 DNAJC27Q9NZQ0 273 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 METRNQ9UJH8 293 aa14.91□□□□□ -0.02
ITGB1-215ENST00000488494 CEACAM18A8MTB9 384 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 F5H0A9 414 aaPredicted RBP14.9□□□□□ -0.02
ITGB1-215ENST00000488494 PRODHO43272 600 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 XRCC2O43543 280 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 SELENOFO60613 162 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 FOXH1O75593 365 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 HMGN1P05114 100 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 ADRA2CP18825 462 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 GATA3P23771 443 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 OPRL1P41146 370 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 CD200P41217 278 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 NAA10P41227 235 aaPredicted RBP14.9□□□□□ -0.02
ITGB1-215ENST00000488494 GATA4P43694 442 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 SLC15A1P46059 708 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 SCGB2A2Q13296 93 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 MAB21L1Q13394 359 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 TMEM236Q5W0B7 351 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 C1QL2Q7Z5L3 287 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 CPOQ8IVL8 374 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 TEX29Q8N6K0 151 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 CELF2-AS1Q8N7Q2 184 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 BBS1Q8NFJ9 593 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 DNAJC9Q8WXX5 260 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 UTP4Q969X6 686 aaKnown RBP14.9□□□□□ -0.02
ITGB1-215ENST00000488494 C19orf24Q9BVV8 132 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 OCEL1Q9H607 264 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 OPA3Q9H6K4 179 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 SLC25A19Q9HC21 320 aa14.9□□□□□ -0.02
ITGB1-215ENST00000488494 NOP16Q9Y3C1 178 aaKnown RBP14.9□□□□□ -0.02
ITGB1-215ENST00000488494 FAM20BO75063 409 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 RPS2P15880 293 aaKnown RBP14.89□□□□□ -0.03
ITGB1-215ENST00000488494 EPHA1P21709 976 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 PMELP40967 661 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 RASSF2P50749 326 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 RPS7P62081 194 aaKnown RBP14.89□□□□□ -0.03
ITGB1-215ENST00000488494 ZNF181Q2M3W8 571 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 ESCO2Q56NI9 601 aa14.89□□□□□ -0.03
ITGB1-215ENST00000488494 FAM201AQ5SY85 155 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms