RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZNF319Q9P2F9 582 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 PURGQ9UJV8 347 aaKnown RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 GTF2A1LQ9UNN4 478 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 EXOGQ9Y2C4 368 aaKnown RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 RPL36Q9Y3U8 105 aaKnown RBP9.44□□□□□ -0.9
UBE4B-210ENST00000488228 HSPE1-MOB4S4R3N1 261 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 PMF1-BGLAPU3KQ54 211 aa9.44□□□□□ -0.9
UBE4B-210ENST00000488228 ACANP16112 2415 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 ABCA2Q9BZC7 2435 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 DYSFO75923 2080 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 TMEM269A0A1B0GVZ9 245 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 DAPL1A0PJW8 107 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 XPNPEP2O43895 674 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 FAM20BO75063 409 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 SRSF10O75494 262 aaKnown RBP9.43□□□□□ -0.9
UBE4B-210ENST00000488228 PNPP00491 289 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 IGHA1P01876 353 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 APOC1P02654 83 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 KRT8P05787 483 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 BMP4P12644 408 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 RAC2P15153 192 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 PAX1P15863 534 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 KITLGP21583 273 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 HSPA13P48723 471 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 MMP15P51511 669 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 SELENOVP59797 346 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 EGR3Q06889 387 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 RAB40BQ12829 278 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 CDK5R2Q13319 367 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 TIGD6Q17RP2 521 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF829Q3KNS6 432 aaPredicted RBP9.43□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF684Q5T5D7 378 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 FAM220AQ7Z4H9 259 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 C1orf174Q8IYL3 243 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 ACBD7Q8N6N7 88 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 TRMT61AQ96FX7 289 aaKnown RBP9.43□□□□□ -0.9
UBE4B-210ENST00000488228 REEP6Q96HR9 211 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 ANKRD60Q9BZ19 345 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 OR10A2Q9H208 303 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 NIPAL2Q9H841 368 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 GNG8Q9UK08 70 aa9.43□□□□□ -0.9
UBE4B-210ENST00000488228 F8P00451 2351 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 PLSCR5A0PG75 271 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 METTL15A6NJ78 407 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 LOC110117498-PIK3R3F6TDL0 507 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 XRCC2O43543 280 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 SPRY3O43610 288 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF254O75437 659 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 FADS2O95864 444 aaKnown RBP9.42□□□□□ -0.9
UBE4B-210ENST00000488228 TUBG1P23258 451 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 MYF6P23409 242 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 PSMB10P40306 273 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 MAGEB1P43366 347 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF81P51508 661 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 HNRNPA0Q13151 305 aaKnown RBP9.42□□□□□ -0.9
UBE4B-210ENST00000488228 SNCBQ16143 134 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 TSTQ16762 297 aaKnown RBP9.42□□□□□ -0.9
UBE4B-210ENST00000488228 CDONQ4KMG0 1287 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 BCL2L15Q5TBC7 163 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 LIPNQ5VXI9 398 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 DEGS2Q6QHC5 323 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 Q6ZR03 302 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 AHSA2Q719I0 299 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 PGAP1Q75T13 922 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 LHFPL3Q86UP9 236 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 LRRC75A-AS1Q8N1F1 130 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF525Q8N782 197 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 BPIFB6Q8NFQ5 453 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 OR10AD1Q8NGE0 317 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 OR56B2PQ8NGI1 322 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 OR52H1Q8NGJ2 320 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 DVL3Q92997 716 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-210ENST00000488228 PPP1R14AQ96A00 147 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 HAVCR1Q96D42 359 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 CNBD2Q96M20 576 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 ZNF184Q99676 751 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-210ENST00000488228 SOX7Q9BT81 388 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 ALG8Q9BVK2 526 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 PBOV1Q9GZY1 135 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 CXXC4Q9H2H0 198 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 TUBG2Q9NRH3 451 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 ERVK13-1Q9NX77 482 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 PCDHGB5Q9Y5G0 923 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 R4GMQ9 66 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 HIVEP1P15822 2718 aa9.42□□□□□ -0.9
UBE4B-210ENST00000488228 hCG_38984A0A1B0GV85 526 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 GGT3PA6NGU5 568 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 CD300LBA8K4G0 201 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 C17orf100A8MU93 164 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 IQCF6A8MYZ5 107 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SLC1A7O00341 560 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 SSX4O60224 188 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 IGHV1-46P01743 117 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 HPXP02790 462 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 MT-ND5P03915 603 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 LIMS3P0CW19 117 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 LIMS4P0CW20 117 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 EFNA4P52798 201 aa9.41□□□□□ -0.9
UBE4B-210ENST00000488228 OR12D2P58182 307 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms