RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ZNF420Q8TAQ5 688 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-209ENST00000487617 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
HDAC4-209ENST00000487617 ZMYND19Q96E35 227 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-209ENST00000487617 PLEKHA8Q96JA3 519 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 SIGLEC11Q96RL6 698 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 ABHD6Q9BV23 337 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 MMADHCQ9H3L0 296 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-209ENST00000487617 MARCH7Q9H992 704 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 G6PC2Q9NQR9 355 aa17.22■□□□□ 0.35
HDAC4-209ENST00000487617 A0A1B0GWJ7 208 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 GGT3PA6NGU5 568 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 CD300LBA8K4G0 201 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 PNPP00491 289 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 HSD11B1P28845 292 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 ZMYND11Q15326 602 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 KLHL12Q53G59 568 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 C1orf146Q5VVC0 180 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 MOGAT3Q86VF5 341 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 LRRC28Q86X40 367 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-209ENST00000487617 CPOQ8IVL8 374 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 TIGD4Q8IY51 512 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 KLHL36Q8N4N3 616 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 DNAJC9Q8WXX5 260 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 TMEM158Q8WZ71 300 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 REPIN1Q9BWE0 567 aaKnown RBP17.21■□□□□ 0.35
HDAC4-209ENST00000487617 SLC25A19Q9HC21 320 aa17.21■□□□□ 0.35
HDAC4-209ENST00000487617 PAPOLBQ9NRJ5 636 aaKnown RBP17.21■□□□□ 0.35
HDAC4-209ENST00000487617 A0A0G2JMP0 313 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 A0A0X1KG70 313 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 CYB5R3P00387 301 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-209ENST00000487617 MDH2P40926 338 aaKnown RBP17.2■□□□□ 0.34
HDAC4-209ENST00000487617 CX3CR1P49238 355 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 RAD23AP54725 363 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 LCN2P80188 198 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 TMEM155Q4W5P6 130 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 FAHD1Q6P587 224 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 OR4M2Q8NGB6 313 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 OR5K1Q8NHB7 308 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 RNF133Q8WVZ7 376 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 SLC22A4Q9H015 551 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 TOR3AQ9H497 397 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 TANC2Q9HCD6 1990 aa17.2■□□□□ 0.34
HDAC4-209ENST00000487617 DYSFO75923 2080 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 LRRC30A6NM36 301 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 PRODHO43272 600 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 TBX1O43435 398 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 XRCC2O43543 280 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 SELENOFO60613 162 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 ANXA2P07355 339 aaKnown RBP17.19■□□□□ 0.34
HDAC4-209ENST00000487617 CA6P23280 308 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 DAPP51397 102 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 CRISP1P54107 249 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 RPS7P62081 194 aaKnown RBP17.19■□□□□ 0.34
HDAC4-209ENST00000487617 OR8G1Q15617 311 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 ATP6AP1Q15904 470 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 DCAF12L2Q5VW00 463 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 CELF2-AS1Q8N7Q2 184 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 AMELYQ99218 206 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 OPA3Q9H6K4 179 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 METTL17Q9H7H0 456 aaPredicted RBP17.19■□□□□ 0.34
HDAC4-209ENST00000487617 PATZ1Q9HBE1 687 aaKnown RBP17.19■□□□□ 0.34
HDAC4-209ENST00000487617 TVP23BQ9NYZ1 205 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 METRNQ9UJH8 293 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 NOP16Q9Y3C1 178 aaKnown RBP17.19■□□□□ 0.34
HDAC4-209ENST00000487617 AP4S1Q9Y587 144 aa17.19■□□□□ 0.34
HDAC4-209ENST00000487617 FOXH1O75593 365 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 ZNF205O95201 554 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 APOC1P02654 83 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 CD200P41217 278 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 SRSF2Q01130 221 aaKnown RBP17.18■□□□□ 0.34
HDAC4-209ENST00000487617 MAB21L1Q13394 359 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 SNAPC1Q16533 368 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 SLC35D3Q5M8T2 416 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 MUC20Q8N307 709 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-209ENST00000487617 BBS1Q8NFJ9 593 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 THEM6Q8WUY1 208 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 ADAT1Q9BUB4 502 aaKnown RBP17.18■□□□□ 0.34
HDAC4-209ENST00000487617 SP140LQ9H930 580 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 DNAJC27Q9NZQ0 273 aa17.18■□□□□ 0.34
HDAC4-209ENST00000487617 FBN1P35555 2871 aaKnown RBP17.18■□□□□ 0.34
HDAC4-209ENST00000487617 G3V2T6 193 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 J3QLI3 93 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 H2BFMP0C1H6 154 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 IRF2P14316 349 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 FASP25445 335 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 ZFP36P26651 326 aaKnown RBP17.17■□□□□ 0.34
HDAC4-209ENST00000487617 PMELP40967 661 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 OPRL1P41146 370 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 NAA10P41227 235 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-209ENST00000487617 GATA4P43694 442 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 ZNF121P58317 390 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-209ENST00000487617 TIGD6Q17RP2 521 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 ZNF181Q2M3W8 571 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 FAM57BQ71RH2 274 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 RHOUQ7L0Q8 258 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.17■□□□□ 0.34
HDAC4-209ENST00000487617 C1orf87Q8N0U7 546 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 PARP8Q8N3A8 854 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 TEX29Q8N6K0 151 aa17.17■□□□□ 0.34
HDAC4-209ENST00000487617 ZNF454Q8N9F8 522 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms