RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SYT7O43581 403 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 NR2C1P13056 603 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 CLDN6P56747 220 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 DHRS2Q13268 280 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 UNC119Q13432 240 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 TMEM176BQ3YBM2 270 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-208ENST00000487245 OVCH2Q7RTZ1 564 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 GTPBP8Q8N3Z3 284 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-208ENST00000487245 DTWD2Q8NBA8 298 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 ACBD4Q8NC06 268 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 OR5M9Q8NGP3 310 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 OR1J2Q8NGS2 313 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 TMEM185BQ9H7F4 350 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 POLR1DQ9Y2S0 133 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 PTRH2Q9Y3E5 179 aaKnown RBP23.13■■□□□ 1.29
HLA-C-208ENST00000487245 SPEF1Q9Y4P9 236 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 A0A0D9SG52 128 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF878C9JN71 531 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 IL2RAP01589 272 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 SLC25A4P12235 298 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 TBPP20226 339 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 RNASE10Q5GAN6 216 aaKnown RBP23.13■■□□□ 1.29
HLA-C-208ENST00000487245 FAHD2BQ6P2I3 314 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-208ENST00000487245 ALKAL2Q6UX46 152 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 TMED4Q7Z7H5 227 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 ADAT3Q96EY9 351 aaPredicted RBP23.13■■□□□ 1.29
HLA-C-208ENST00000487245 FAHD2AQ96GK7 314 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 GAL3ST1Q99999 423 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 B3GNT4Q9C0J1 378 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 SEC61A2Q9H9S3 476 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 PFDN2Q9UHV9 154 aa23.13■■□□□ 1.29
HLA-C-208ENST00000487245 SULT2B1O00204 365 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 UMODP07911 640 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 ERCC1P07992 297 aaPredicted RBP23.12■■□□□ 1.29
HLA-C-208ENST00000487245 CD34P28906 385 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 HIST3H3Q16695 136 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 TMPPEQ6ZT21 453 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 TRAPPC6BQ86SZ2 158 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 OR52N4Q8NGI2 321 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 OR5D14Q8NGL3 314 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 CXorf58Q96LI9 332 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 ANGPTL4Q9BY76 406 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 LHFPL6Q9Y693 200 aa23.12■■□□□ 1.29
HLA-C-208ENST00000487245 A8MXK9 166 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 SCO1O75880 301 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 OPN1LWP04000 364 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 UBBP0CG47 229 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 COX6A1P12074 109 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 MGMTP16455 207 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 RAB3AP20336 220 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 ZBTB25P24278 435 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 EIF1AXP47813 144 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 RPS27AP62979 156 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 UBA52P62987 128 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 GLRX5Q86SX6 157 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 SLC38A6Q8IZM9 456 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 EIF4E3Q8N5X7 224 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 COQ8AQ8NI60 647 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 ZMAT3Q9HA38 289 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 VSIG4Q9Y279 399 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 TMEM14DPA8MWL7 114 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 KRBOX1C9JBD0 128 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 VSIG8P0DPA2 414 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 SFTPDP35247 375 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF345Q14585 488 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 TAF13Q15543 124 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 CDNFQ49AH0 187 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 OR2W3Q7Z3T1 314 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 HSD17B13Q7Z5P4 300 aaPredicted RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 LYG2Q86SG7 212 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 BEST3Q8N1M1 668 aa23.11■■□□□ 1.29
HLA-C-208ENST00000487245 ZC3H10Q96K80 434 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 MYEF2Q9P2K5 600 aaKnown RBP23.11■■□□□ 1.29
HLA-C-208ENST00000487245 FGF2P09038 288 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 GNALP38405 381 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 GABREP78334 506 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 FOXK1P85037 733 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 PRAMEF20Q5VT98 475 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 OR2I1PQ8NGU4 316 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 PPA2Q9H2U2 334 aa23.1■■□□□ 1.29
HLA-C-208ENST00000487245 FARSAQ9Y285 508 aaKnown RBP23.1■■□□□ 1.29
HLA-C-208ENST00000487245 SSR4P51571 173 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 LIN54Q6MZP7 749 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 CFAP77Q6ZQR2 320 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 PDZD9Q8IXQ8 264 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 KCNRGQ8N5I3 272 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 GALNT11Q8NCW6 608 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 OR2Y1Q8NGV0 311 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 SLC25A32Q9H2D1 315 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 PLEKHA6Q9Y2H5 1048 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 PRUNE2Q8WUY3 3088 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 OR5H14A6NHG9 310 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 KLF7O75840 302 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-208ENST00000487245 CXADRP78310 365 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 SCGB2B2Q4G0G5 96 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 Q7L0L9 218 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 ZNF546Q86UE3 836 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 OR4S1Q8NGB4 309 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 NTNG2Q96CW9 530 aa23.09■■□□□ 1.29
HLA-C-208ENST00000487245 ANAPC10Q9UM13 185 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms