RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 CENPKQ9BS16 269 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 C1orf50Q9BV19 199 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 MS4A8Q9BY19 250 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 DPY30Q9C005 99 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 OR51B5Q9H339 312 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 POLE4Q9NR33 117 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 CCDC167Q9P0B6 97 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 NDUFAF1Q9Y375 327 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 POLR3HQ9Y535 204 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-216ENST00000487043 TP53BP1Q12888 1972 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-216ENST00000487043 KMT2EQ8IZD2 1858 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 TMEM131Q92545 1883 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 ADAMTS9Q9P2N4 1935 aa3.17□□□□□ -1.9
PTCD3-216ENST00000487043 PCDH15Q96QU1 1955 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 IGHV5-51A0A0C4DH38 117 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 GNG14A0A1W2PPG7 69 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TLCD2A6NGC4 264 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 GABRR3A8MPY1 467 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 BBIP1A8MTZ0 92 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ANKRD65E5RJM6 399 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 E9PQ18 207 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 H0YGG7 62 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 PLPP1O14494 284 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TXNDC9O14530 226 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 AIM2O14862 343 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TOX3O15405 576 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 FCMRO60667 390 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 GALR3O60755 368 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SCN2BO60939 215 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 VENTXO95231 258 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RENP00797 406 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SERPIND1P05546 499 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 KLK1P06870 262 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 KRT16P08779 473 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 H2BFMP0C1H6 154 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SLC35G6P0C7Q6 338 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF806P0C7X5 589 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SMIM10L1P0DMW3 83 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 MMP11P24347 488 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 GABRA4P48169 554 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ALDH3B2P48448 385 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 DUSP3P51452 185 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RAP1GDS1P52306 607 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 LIM2P55344 173 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 GFERP55789 205 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RND3P61587 244 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 STXBP1P61764 594 aaKnown RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 PPP1CAP62136 330 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 VLDLRP98155 873 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 OC90Q02509 493 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TGM3Q08188 693 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF763Q0D2J5 394 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RIPPLY1Q0D2K3 151 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ART3Q13508 389 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RCAN2Q14206 197 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 LTB4RQ15722 352 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SNCBQ16143 134 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 VPS26BQ4G0F5 336 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 DNAL1Q4LDG9 190 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 C14orf177Q52M58 125 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 OTUD3Q5T2D3 398 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 AP1ARQ63HQ0 302 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 PVRIGQ6DKI7 326 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 OR4F3Q6IEY1 312 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 FRMPD2BQ6IN97 320 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 FAHD2BQ6P2I3 314 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 WDR74Q6RFH5 385 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 FAM92BQ6ZTR7 304 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 PAGE2Q7Z2X7 111 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 COMMD6Q7Z4G1 85 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 NANOGNBQ7Z5D8 188 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SLC25A42Q86VD7 318 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 EID2Q8N6I1 236 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 KRTCAP2Q8N6L1 136 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 NATD1Q8N6N6 113 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 CSNK1A1LQ8N752 337 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 CSNK1G2-AS1Q8NCQ2 148 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 OR2L5Q8NG80 312 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 OR8J2Q8NGG1 315 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 C16orf78Q8WTQ4 265 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 STARD8Q92502 1023 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 NAT6Q93015 286 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RERGQ96A58 199 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TESCQ96BS2 214 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ROPN1LQ96C74 230 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TM4SF18Q96CE8 201 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 RCN3Q96D15 328 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 MS4A6EQ96DS6 147 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ZBED6CLQ96FA7 236 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 FAHD2AQ96GK7 314 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 SMIM10Q96HG1 83 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TPD52L3Q96J77 140 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF285Q96NJ3 590 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 TSSK3Q96PN8 268 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 HOPXQ9BPY8 73 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 EBPLQ9BY08 206 aa3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF717Q9BY31 904 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-216ENST00000487043 ROGDIQ9GZN7 287 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms