RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ZNF141Q15928 474 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SSX2Q16385 188 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 RHBDD2Q6NTF9 364 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SUMF2Q8NBJ7 301 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 OR2G2Q8NGZ5 317 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 CMTM3Q96MX0 182 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 POFUT1Q9H488 388 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 A0A0A6YYH2 397 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 A6NJ64 397 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 PRICKLE3O43900 615 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 FBXO24O75426 580 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 TUBG1P23258 451 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 GABRA2P47869 451 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 GLIPR1L1Q6UWM5 242 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ANKRD37Q7Z713 158 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ADGRE4PQ86SQ3 457 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 OR4K15Q8NH41 348 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 LOXL4Q96JB6 756 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 OXGR1Q96P68 337 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 EP300Q09472 2414 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 A0A0G2JMZ2 1700 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ALG1L2C9J202 215 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 M0QYG6 137 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 APEHP13798 732 aaKnown RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 MVDP53602 400 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SUMO3P55854 103 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 MYBPHQ13203 477 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SSPNQ14714 243 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 PLGLAQ15195 96 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 LINC00303Q3SY05 128 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 NKAIN3Q8N8D7 197 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF610Q8N9Z0 462 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 OR11G2Q8NGC1 345 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 IL1F10Q8WWZ1 152 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 RRNAD1Q96FB5 475 aaKnown RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SPACA5Q96QH8 159 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 KPTNQ9Y664 436 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 OR6C68A6NDL8 312 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 CHRNB4P30926 498 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 RPS23P62266 143 aaKnown RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 RNF212Q495C1 297 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SSX9Q7RTT3 188 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 NANPQ8TBE9 248 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SCMH1Q96GD3 660 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 GNRHR2Q96P88 292 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 ABHD6Q9BV23 337 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 FAM212BQ9NTI7 297 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-228ENST00000486227 DECR2Q9NUI1 292 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 SBF1O95248 1867 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 CACNA1GO43497 2377 aa9.92□□□□□ -0.82
HDAC6-228ENST00000486227 C7orf66A4D0T2 115 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 ARPC3O15145 178 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 MPPED1O15442 326 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 FOXS1O43638 330 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 WNT1P04628 370 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 EGR3Q06889 387 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 PMPCAQ10713 525 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 OR1C1Q15619 314 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 CD226Q15762 336 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 TBC1D28Q2M2D7 210 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 ELFN2Q5R3F8 820 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 MEX3BQ6ZN04 569 aaKnown RBP9.91□□□□□ -0.82
HDAC6-228ENST00000486227 SULF2Q8IWU5 870 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 OR52N5Q8NH56 324 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 BANF2Q9H503 90 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 PPP1R3EQ9H7J1 279 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 FLRT3Q9NZU0 649 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 PIGLQ9Y2B2 252 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
HDAC6-228ENST00000486227 A0A087WZY1 265 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 GUSBP08236 651 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 CXCL3P19876 107 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 CNR1P21554 472 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 NME2P22392 152 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 INSL4Q14641 139 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 PRSS53Q2L4Q9 553 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 LGALSLQ3ZCW2 172 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-228ENST00000486227 FAM74A1Q5RGS3 127 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 FAAP20Q6NZ36 180 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 CCDC71LQ8N9Z2 235 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 OR11H7Q8NGC8 314 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 MOGAT1Q96PD6 335 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 OR5B12Q96R08 314 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 ABHD1Q96SE0 405 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 MYOTQ9UBF9 498 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 RAB22AQ9UL26 194 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 SVILO95425 2214 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 CBR1P16152 277 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 DCTDP32321 178 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 PLA2G7Q13093 441 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 SLC9A3R2Q15599 337 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 AADACL4Q5VUY2 407 aa9.91□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF321PQ8N8H1 164 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms