RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 E9PBE3 544 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 TRIM13O60858 407 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 LYPD3O95274 346 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 KRT75O95678 551 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 DBHP09172 617 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 SELLP14151 372 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 AMY2BP19961 511 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 ECHS1P30084 290 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 S100A3P33764 101 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 SLC7A5Q01650 507 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 RPL18Q07020 188 aaKnown RBP6.57□□□□□ -1.36
XRN1-212ENST00000486211 DPY19L1Q2PZI1 675 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 PLA1AQ53H76 456 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 WDR38Q5JTN6 314 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 BEND6Q5SZJ8 279 aaPredicted RBP6.57□□□□□ -1.36
XRN1-212ENST00000486211 DHRS4L2Q6PKH6 230 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 LCNL1Q6ZST4 164 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 ZNF826PQ6ZT77 177 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 HDDC2Q7Z4H3 204 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 CENPVQ7Z7K6 275 aaPredicted RBP6.57□□□□□ -1.36
XRN1-212ENST00000486211 CPPED1Q9BRF8 314 aaPredicted RBP6.57□□□□□ -1.36
XRN1-212ENST00000486211 CACYBPQ9HB71 228 aaKnown RBP6.57□□□□□ -1.36
XRN1-212ENST00000486211 TMEM27Q9HBJ8 222 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 C19orf73Q9NVV2 129 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 SELENONQ9NZV5 590 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 SMAD5-AS1Q9Y6J3 95 aa6.57□□□□□ -1.36
XRN1-212ENST00000486211 GMNCA6NCL1 334 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 FAM90A8PA6NJQ4 464 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 C12orf71A8MTZ7 269 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.56□□□□□ -1.36
XRN1-212ENST00000486211 SGCEO43556 437 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 FMO6PO60774 539 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 BPNT1O95861 308 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 MSR1P21757 451 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 PAICSP22234 425 aaKnown RBP6.56□□□□□ -1.36
XRN1-212ENST00000486211 IL12AP29459 219 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 SERPINB5P36952 375 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 ECI1P42126 302 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 TGM4P49221 684 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 DAP3P51398 398 aaKnown RBP6.56□□□□□ -1.36
XRN1-212ENST00000486211 CLNS1AP54105 237 aaKnown RBP6.56□□□□□ -1.36
XRN1-212ENST00000486211 CD47Q08722 323 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 NPTX1Q15818 432 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 RABL3Q5HYI8 236 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 KHDC1LQ5JSQ8 128 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 KCTD18Q6PI47 426 aaPredicted RBP6.56□□□□□ -1.36
XRN1-212ENST00000486211 COLCA1Q6ZS62 124 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 C18orf65Q6ZTR6 163 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 OVCH2Q7RTZ1 564 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 NANOGNBQ7Z5D8 188 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 CCDC63Q8NA47 563 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 OR51D1Q8NGF3 324 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 OR4X2Q8NGF9 303 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 OR5L1Q8NGL2 311 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 BBS10Q8TAM1 723 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 MAL2Q969L2 176 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 LYZL4Q96KX0 146 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 TM2D3Q9BRN9 247 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 ZNF649Q9BS31 505 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 NUF2Q9BZD4 464 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 ZMAT4Q9H898 229 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 WDR76Q9H967 626 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 EMC7Q9NPA0 242 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 POLE4Q9NR33 117 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 C1orf123Q9NWV4 160 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 SLAMF8Q9P0V8 285 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 SCOCQ9UIL1 159 aa6.56□□□□□ -1.36
XRN1-212ENST00000486211 A0A1W2PPL8 197 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 NPIPB13A6NJU9 1138 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 NPIPB4C9JG80 1138 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 BLOC1S5-TXNDC5H3BN57 136 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 KPNA4O00629 521 aaPredicted RBP6.55□□□□□ -1.36
XRN1-212ENST00000486211 ACOT8O14734 319 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 CHP2O43745 196 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 ABHD2P08910 425 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 TSPAN19P0C672 248 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 FRMD6-AS1P0C7T7 363 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 ETS2P15036 469 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 MYCNOSP40205 109 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 AQP2P41181 271 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 RGS8P57771 180 aaPredicted RBP6.55□□□□□ -1.36
XRN1-212ENST00000486211 NCALDP61601 193 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 SCRN3Q0VDG4 424 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 PCK2Q16822 640 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 HHATQ5VTY9 493 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 LHFPL4Q7Z7J7 247 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 CNPY4Q8N129 248 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 OR52H1Q8NGJ2 320 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 MOSPD2Q8NHP6 518 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 TCP10LQ8TDR4 215 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 LRRC8CQ8TDW0 803 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 ACOT11Q8WXI4 607 aaPredicted RBP6.55□□□□□ -1.36
XRN1-212ENST00000486211 APOBEC3DQ96AK3 386 aaPredicted RBP6.55□□□□□ -1.36
XRN1-212ENST00000486211 VPS33AQ96AX1 596 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 WACQ9BTA9 647 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 ZNF426Q9BUY5 554 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 ALG12Q9BV10 488 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 TPT1P8Q9HAU6 139 aa6.55□□□□□ -1.36
XRN1-212ENST00000486211 INIPQ9NRY2 104 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms