RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RGS7BPQ6MZT1 257 aaPredicted RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 ARL9Q6T311 187 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 RFPL4BQ6ZWI9 263 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 HIST2H3AQ71DI3 136 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 SSX8Q7RTT4 187 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 KLBQ86Z14 1044 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 ZNF679Q8IYX0 411 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 ZNF101Q8IZC7 436 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 KLHL36Q8N4N3 616 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 ZFP41Q8N8Y5 198 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 IL17RDQ8NFM7 739 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 OR2AE1Q8NHA4 323 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 SLC25A40Q8TBP6 338 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 GATAD2BQ8WXI9 593 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 NRGNQ92686 78 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 MYDGFQ969H8 173 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 PPP1R14AQ96A00 147 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 MRPL48Q96GC5 212 aaKnown RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 MNTQ99583 582 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 SYT3Q9BQG1 590 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 OR2J1Q9GZK6 312 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 CLEC4MQ9H2X3 399 aaPredicted RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 POFUT1Q9H488 388 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 ISG20L2Q9H9L3 353 aaKnown RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 FGF20Q9NP95 211 aaPredicted RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 PLCXD1Q9NUJ7 323 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 ACOXLQ9NUZ1 547 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 PAK1IP1Q9NWT1 392 aaPredicted RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 ERVK13-1Q9NX77 482 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 CISD1Q9NZ45 108 aaKnown RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 CLEC2DQ9UHP7 191 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 MRM2Q9UI43 246 aaKnown RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 DUSP13Q9UII6 198 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 BLOC1S6Q9UL45 172 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 DIMT1Q9UNQ2 313 aaKnown RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 STARD10Q9Y365 291 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 EXOSC1Q9Y3B2 195 aaKnown RBP4.85□□□□□ -1.63
COPS3-208ENST00000486032 SNX5Q9Y5X3 404 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 PDZD2O15018 2839 aa4.85□□□□□ -1.63
COPS3-208ENST00000486032 TMEM269A0A1B0GVZ9 245 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 A0A1W2PPR1 153 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 A0A1W2PPW3 197 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 C5orf63A6NC05 138 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 SHISA9B4DS77 424 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 E7EQL1 145 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 LOC110117498-PIK3R3F6TDL0 507 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 SMPD2O60906 423 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ZNF254O75437 659 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 CTAG2O75638 210 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 CLPTM1O96005 669 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 CDK1P06493 297 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 RPSAP08865 295 aaKnown RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 HTR1AP08908 422 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 TACSTD2P09758 323 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 CCDC159P0C7I6 412 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 LIMS3P0CW19 117 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 LIMS4P0CW20 117 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 HSMCR30P0CW71 290 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ZNF35P13682 527 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 NR4A1P22736 598 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ANOS1P23352 680 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 CRHBPP24387 322 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 DCKP27707 260 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 LOXP28300 417 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 GCH1P30793 250 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 MPV17P39210 176 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 RAD52P43351 418 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 GTF2A1P52655 376 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 GBX2P52951 348 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 PPP1CBP62140 327 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ACTA2P62736 377 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ACTG2P63267 376 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 EGR3Q06889 387 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 MALLQ13021 153 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 GALEQ14376 348 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 HLXQ14774 488 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 MED22Q15528 200 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 TIGD6Q17RP2 521 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 RSPO1Q2MKA7 263 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 ZNF829Q3KNS6 432 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 SNAI3Q3KNW1 292 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 C3orf36Q3SXR2 165 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ZNF718Q3SXZ3 478 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 LIPNQ5VXI9 398 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 DRAM2Q6UX65 266 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 UNQ6126/PRO20091Q6UXV3 157 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 TMPRSS11AQ6ZMR5 421 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 MRPL21Q7Z2W9 205 aaKnown RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 LRP11Q86VZ4 500 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 OR5AS1Q8N127 324 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 FBXL14Q8N1E6 418 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 FAM169BQ8N8A8 192 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 ACBD4Q8NC06 268 aa4.84□□□□□ -1.63
COPS3-208ENST00000486032 LILRB1Q8NHL6 650 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 IPCEF1Q8WWN9 437 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 APOBEC3DQ96AK3 386 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 FAM71F1Q96KD3 344 aaPredicted RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 DCLRE1CQ96SD1 692 aaKnown RBP4.84□□□□□ -1.63
COPS3-208ENST00000486032 DOK1Q99704 481 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms